G214900


Basic Information

Item Value
gene id G214900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 409895 ~ 414405 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244468
gttttaatccAGCCAACTTTAATCCAGTTTTAATCCAGCCAtctctaatccagttttaatccAGCCACCTCTAATCCCATTTTAATAGAGCCACTtctaatccagttttaatccagcctcctctaatccagttttaatagagccacctctaatccagttttaatagagccatctctaatccagttttaatagagccacctgtaatccagttttaatTGAGCCAACTCCaatccagttttaatagagccaactctaatccagttttaatagagccaactcaaatccagttttaatagagccacctctaatccagttttaatagagccacctctaATCCAGTTTCAATAGAGCCACCTCTAATCCAATTTTAATAGTCACCTCTAATCCCGTTTTAATAGAGCCAACTCTAATCCCGTTTTAATAGAGTCACCTCTAATCCcgttttaatagagccacctctaatcccgttttaatagagccacctctaatccagttttaacTGAGCCAACTCCAATCCTGTTTTAATAGAGCCAactctaatccagttttaatagagccaactcaaatccagttttaatagagccacctctaatcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244468 True 596 lncRNA 0.38 2 409895 414405

Neighbor

gene id symbol gene type direction distance location
LOC118944729 NA coding downstream 159347 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 254324 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 335342 63916 ~ 74553 (-)
irx2a irx2 coding upstream 96562 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 464595 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1157272 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1159959 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 1168711 1583116 ~ 1593615 (-)
G214898 NA non-coding downstream 1899 406124 ~ 407996 (-)
G214891 NA non-coding downstream 8245 401398 ~ 401650 (-)
G214890 NA non-coding downstream 9662 399959 ~ 400233 (-)
G214876 NA non-coding downstream 29516 378703 ~ 380379 (-)
G214783 NA non-coding downstream 108693 294674 ~ 301202 (-)
G214917 NA non-coding upstream 10898 425303 ~ 425976 (-)
G214931 NA non-coding upstream 24015 438420 ~ 439632 (-)
G214952 NA non-coding upstream 43927 458332 ~ 458638 (-)
G214963 NA non-coding upstream 53691 468096 ~ 468526 (-)
G214976 NA non-coding upstream 61770 476175 ~ 476663 (-)
G214663 NA other downstream 230304 177723 ~ 179591 (-)
G214982 NA other upstream 66642 481047 ~ 481609 (-)
G215354 NA other upstream 501554 915959 ~ 919673 (-)
G215950 NA other upstream 1185821 1600226 ~ 1618140 (-)
G215956 NA other upstream 1244675 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1247284 1661660 ~ 1673583 (-)

Expression


Co-expression Network