G214962


Basic Information

Item Value
gene id G214962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 468013 ~ 468526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244546
aatCGTGTTGGGATGTAGTATGATCTGTTCCTGCTGCTTTTCATTGAATAGTGTTGGGCTGTAGTGTGATctgttactgttgctgctgttcattgaatagtgttgggctgtagtatggtctgttactgctgctgttcattgaatCGTGTTGGGCTGTAGTAtggtctgttactgctgctgttcattgaatagTGTTGGGCTGTATTATgatctgttactgctgctgttcattgaatagtgttgggctgtagtgtgatctgttactgctgctgttcattgaatagtgttgggctgtagtatgatctgttactgctgctgttcattgaatagtgttgggctgtagtatggtctgttactgctgctgctgttcatTAAATAGTGTtggtctgttactgctgctgttcattgaatagtgttgggctgtagtatgatctgttactgctgctgttcattgaatagtgttgggctgtagtatggtctgttactgctgctgctgttcatTAAATAGTGTtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244546 True 514 lncRNA 0.42 1 468013 468526

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 251610 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 271497 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 472037 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 656791 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 838481 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1067353 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1076731 1545257 ~ 1567659 (+)
G214959 NA non-coding upstream 1081 465394 ~ 466932 (+)
G214951 NA non-coding upstream 9371 458407 ~ 458642 (+)
G214934 NA non-coding upstream 25634 441788 ~ 442379 (+)
G214915 NA non-coding upstream 44401 423243 ~ 423612 (+)
G214910 NA non-coding upstream 46938 420815 ~ 421075 (+)
G214966 NA non-coding downstream 2460 470986 ~ 471461 (+)
G214980 NA non-coding downstream 11803 480329 ~ 480531 (+)
G214981 NA non-coding downstream 12662 481188 ~ 481408 (+)
G214985 NA non-coding downstream 16881 485407 ~ 485737 (+)
G214986 NA non-coding downstream 18340 486866 ~ 487250 (+)
G215012 NA other downstream 47834 516360 ~ 518187 (+)
G215455 NA other downstream 615916 1084442 ~ 1086530 (+)
G215792 NA other downstream 1054743 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1141112 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1167072 1635598 ~ 1680107 (+)

Expression


Co-expression Network