G214976


Basic Information

Item Value
gene id G214976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 476175 ~ 476663 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244562
GTCTTACCAGACCAGTAACCAGTTCAGTCTTACCAGACCAGTAacgagttcaaatcaaatcaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccacaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggcaaaaacctaggaagaaacctagagaggaaccaggctatgtgggttggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaattaccagcatggtccaataataataaggcagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaagagagaatt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244562 True 489 lncRNA 0.46 1 476175 476663

Neighbor

gene id symbol gene type direction distance location
LOC118944729 NA coding downstream 225627 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 320604 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 401622 63916 ~ 74553 (-)
irx2a irx2 coding upstream 34304 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 402337 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1095014 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1097701 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 1106453 1583116 ~ 1593615 (-)
G214963 NA non-coding downstream 7649 468096 ~ 468526 (-)
G214952 NA non-coding downstream 17537 458332 ~ 458638 (-)
G214931 NA non-coding downstream 36543 438420 ~ 439632 (-)
G214917 NA non-coding downstream 50199 425303 ~ 425976 (-)
G214900 NA non-coding downstream 61770 409895 ~ 414405 (-)
G214984 NA non-coding upstream 5334 481997 ~ 484724 (-)
G214989 NA non-coding upstream 11823 488486 ~ 489130 (-)
G214992 NA non-coding upstream 15815 492478 ~ 495223 (-)
G214994 NA non-coding upstream 20703 497366 ~ 497663 (-)
G215005 NA non-coding upstream 32930 509593 ~ 509912 (-)
G214663 NA other downstream 296584 177723 ~ 179591 (-)
G214982 NA other upstream 4384 481047 ~ 481609 (-)
G215354 NA other upstream 439296 915959 ~ 919673 (-)
G215950 NA other upstream 1123563 1600226 ~ 1618140 (-)
G215956 NA other upstream 1182417 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1185026 1661660 ~ 1673583 (-)

Expression


Co-expression Network