G214986


Basic Information

Item Value
gene id G214986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 486866 ~ 487250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244573
GGCCTACAAAAAGCggttagagcctacataaagctgttagggcctacataaagctgttagggcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgctagggcctacataaagctgttagggcctacataaaaatgtcagggcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgttagagcctacataaagctgttggGGCCTACATGAAGCtgctagggcctacataaagctgttagggcctacataaagctgtcagggcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcct

Function

NR:

description
putative D-tyrosyl-tRNA(Tyr) deacylase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244573 True 385 lncRNA 0.42 1 486866 487250

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 270463 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 290350 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 453313 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 638067 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 819757 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1048629 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1058007 1545257 ~ 1567659 (+)
G214985 NA non-coding upstream 1129 485407 ~ 485737 (+)
G214981 NA non-coding upstream 5458 481188 ~ 481408 (+)
G214980 NA non-coding upstream 6335 480329 ~ 480531 (+)
G214966 NA non-coding upstream 15405 470986 ~ 471461 (+)
G214962 NA non-coding upstream 18340 468013 ~ 468526 (+)
G214987 NA non-coding downstream 221 487471 ~ 488119 (+)
G214988 NA non-coding downstream 1432 488682 ~ 489186 (+)
G214990 NA non-coding downstream 4778 492028 ~ 495223 (+)
G214995 NA non-coding downstream 10610 497860 ~ 501722 (+)
G215009 NA non-coding downstream 22966 510216 ~ 510481 (+)
G215012 NA other downstream 29110 516360 ~ 518187 (+)
G215455 NA other downstream 597192 1084442 ~ 1086530 (+)
G215792 NA other downstream 1036019 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1122388 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1148348 1635598 ~ 1680107 (+)

Expression


Co-expression Network