G214987


Basic Information

Item Value
gene id G214987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 487471 ~ 488119 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244574
acataaagctgtcagggcctacataaagctgttagggcctacataaagctgtcagggcctacatagagctgttagggcctacataacgctgttagggcctacataaagctgttagggcctacataaagcggttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgttggGGCCTACATGAAGCtgctagggcctacataaagctgttagggcctacataaagctgtcagggcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgtcagggcctacataaagctgttagggacTACATAACGCTGTTAGGGCCAacataaagctgttagagcctacataaagctgttagggcctacatataGCTGTTAGGGTCTACATGAAGCTGTTAGGGTCTACATGAAGCTGTTAGAGCCTACAGaaagctgttagagcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgtcagggcctacataaagc

Function

NR:

description
putative D-tyrosyl-tRNA(Tyr) deacylase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244574 True 649 lncRNA 0.49 1 487471 488119

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 271068 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 290955 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 452444 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 637198 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 818888 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1047760 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1057138 1545257 ~ 1567659 (+)
G214986 NA non-coding upstream 221 486866 ~ 487250 (+)
G214985 NA non-coding upstream 1734 485407 ~ 485737 (+)
G214981 NA non-coding upstream 6063 481188 ~ 481408 (+)
G214980 NA non-coding upstream 6940 480329 ~ 480531 (+)
G214966 NA non-coding upstream 16010 470986 ~ 471461 (+)
G214988 NA non-coding downstream 563 488682 ~ 489186 (+)
G214990 NA non-coding downstream 3909 492028 ~ 495223 (+)
G214995 NA non-coding downstream 9741 497860 ~ 501722 (+)
G215009 NA non-coding downstream 22097 510216 ~ 510481 (+)
G215045 NA non-coding downstream 60464 548583 ~ 549057 (+)
G215012 NA other downstream 28241 516360 ~ 518187 (+)
G215455 NA other downstream 596323 1084442 ~ 1086530 (+)
G215792 NA other downstream 1035150 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1121519 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1147479 1635598 ~ 1680107 (+)

Expression


Co-expression Network