G214988


Basic Information

Item Value
gene id G214988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 488682 ~ 489186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244575
tagggcctacataaagctgttagggcctacataaaactgtcagggcctacataaagctgctagggcctacataaagcggttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagggcctacataaagctgttagagcctacataaagctgttagggccaacataaagctgttagagcctacataaagctgttagggcctacatataGCTGTTAGGGTCTACATGAAGCTGTTAGGGTCTACATGaagctgttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgtcagggcctacataaagctgttagggcctacataaagctgtcagggcctacatagagctgttagggcctacataacgctgttagggcctacataaagctgctagggcctacataaagctgtcaggg

Function

NR:

description
putative D-tyrosyl-tRNA(Tyr) deacylase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244575 True 505 lncRNA 0.49 1 488682 489186

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 272279 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 292166 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 451377 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 636131 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 817821 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1046693 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1056071 1545257 ~ 1567659 (+)
G214987 NA non-coding upstream 563 487471 ~ 488119 (+)
G214986 NA non-coding upstream 1432 486866 ~ 487250 (+)
G214985 NA non-coding upstream 2945 485407 ~ 485737 (+)
G214981 NA non-coding upstream 7274 481188 ~ 481408 (+)
G214980 NA non-coding upstream 8151 480329 ~ 480531 (+)
G214990 NA non-coding downstream 2842 492028 ~ 495223 (+)
G214995 NA non-coding downstream 8674 497860 ~ 501722 (+)
G215009 NA non-coding downstream 21030 510216 ~ 510481 (+)
G215045 NA non-coding downstream 59397 548583 ~ 549057 (+)
G215046 NA non-coding downstream 62533 551719 ~ 551920 (+)
G215012 NA other downstream 27174 516360 ~ 518187 (+)
G215455 NA other downstream 595256 1084442 ~ 1086530 (+)
G215792 NA other downstream 1034083 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1120452 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1146412 1635598 ~ 1680107 (+)

Expression


Co-expression Network