G214990


Basic Information

Item Value
gene id G214990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 492028 ~ 495223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244577
acataaagctgttagggcctacatgaaGCTGTTaaagcctacataaagctgttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaacgtgttagagcctacataaagctacttgggcctacataaagctgttagggcctacataaagctgttagggcctacataaaactgtcagggcctacataaagctgctagggcctacataaagcggttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagggcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgctagggcctacataaagctgttagggcctacataaaaaTGTCAgggtctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgttagagcctacataaagctgttggGGCCTACATGAAGCtgctagggcctacataaagctgttagggcctacataaagctgtcagggcctacataaagctgttagggcctacataaagctgttagggcctacataacgctgttagggcctacataaagctgtcagggcctacataaagctgttagggacTACATAACGCTGTTAGGGCCAacataaagctgttagagcctacataaagctgttagagcctacaGAAAGCTGTTAGAGCCAagataaagctgttagggcctttataaagctgttagggcctacataaagctgttagggcctgcATAAAGCTGTTACAGCCTACATAAAACTtgtagggcctacataaagctgttagggcctacataaagctgttagagcctacataaagctgttagagcctacataaagctgttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagagcctacataaagctgttagagcctacataaagctgttagagcatacataaagctgtcagggcctacataaagctgttagggcctacataaagctgtcagggcctacataaagctgctagggcctacataaagcggttagagcctacataaagctgttagggcctacataacaCCTTTAGGGCCAacataaagctgttagagcctacataaaatgtttagggcctacataaagctgttagggcctacataaagctgttagagcctacataaagctatTAGGGCCTACATATAGCTGTTAGGGTCTACATGaagctgttagagcctacataaagctgttagagcctacataaagctgttagggcctacataaagctgttagggtcTACATGaagctgttagagcctacataaagctgttagagccTTCATGAAGCTGTTAGAGTCTACTTGAaactgttagagcctacataaagctgttagggtcTACATGaagctgttagagcctacatgAAGCTGTTAGGACCTACATCaagctgttagagcctacataatgcagttagggcctacataaagctgttagggcctccGTAAAGCTGTCAGGGCCGGCATAAAGGTGTTAGAGCCTACATGAAGCTGTTAGAGCCTGCATAAAGCTattagagcctacataaagctgttagggcctacatagaGCTGTTAGGTCCTACATAAAGTTGCTAGGGCCttcataaagctgttagggcctacataaagctgttaggg

Function

NR:

description
PREDICTED: extensin-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244577 True 1737 lncRNA 0.44 2 492028 495223

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 275625 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 295512 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 445340 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 630094 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 811784 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1040656 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1050034 1545257 ~ 1567659 (+)
G214988 NA non-coding upstream 2842 488682 ~ 489186 (+)
G214987 NA non-coding upstream 3909 487471 ~ 488119 (+)
G214986 NA non-coding upstream 4778 486866 ~ 487250 (+)
G214985 NA non-coding upstream 6291 485407 ~ 485737 (+)
G214981 NA non-coding upstream 10620 481188 ~ 481408 (+)
G214995 NA non-coding downstream 2637 497860 ~ 501722 (+)
G215009 NA non-coding downstream 14993 510216 ~ 510481 (+)
G215045 NA non-coding downstream 53360 548583 ~ 549057 (+)
G215046 NA non-coding downstream 56496 551719 ~ 551920 (+)
G215047 NA non-coding downstream 57614 552837 ~ 553218 (+)
G215012 NA other downstream 21137 516360 ~ 518187 (+)
G215455 NA other downstream 589219 1084442 ~ 1086530 (+)
G215792 NA other downstream 1028046 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1114415 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1140375 1635598 ~ 1680107 (+)

Expression


Co-expression Network