G215009


Basic Information

Item Value
gene id G215009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 510216 ~ 510481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244620
CACGAGTAGTCCCCGGATGGAGCTAAACGCCTATAAGAATGGCGTGAAAAGGCCCTTTAGAAAACGGATAGGTGGTAAGCTTCTCTCGACTGTGCTGTCTCAAACAAACAGCAATTAATACAGGCTATGCCATTCCCAAAAGTCTTATCGTTTACACTTGATTAATAATTCGATTTCTAAAAGCAGTAGCCTAACCAAAGAGAAATACATTTTCATGCGACAATATAAAGGAGATGAATGAAAAAATGAAAGCAGATTGAAATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244620 True 266 lncRNA 0.38 1 510216 510481

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 293813 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 313700 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 430082 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 614836 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 796526 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 1025398 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 1034776 1545257 ~ 1567659 (+)
G214995 NA non-coding upstream 8494 497860 ~ 501722 (+)
G214990 NA non-coding upstream 14993 492028 ~ 495223 (+)
G214988 NA non-coding upstream 21030 488682 ~ 489186 (+)
G214987 NA non-coding upstream 22097 487471 ~ 488119 (+)
G214986 NA non-coding upstream 22966 486866 ~ 487250 (+)
G215045 NA non-coding downstream 38102 548583 ~ 549057 (+)
G215046 NA non-coding downstream 41238 551719 ~ 551920 (+)
G215047 NA non-coding downstream 42356 552837 ~ 553218 (+)
G215073 NA non-coding downstream 75049 585530 ~ 586141 (+)
G215084 NA non-coding downstream 92941 603422 ~ 603763 (+)
G215012 NA other downstream 5879 516360 ~ 518187 (+)
G215455 NA other downstream 573961 1084442 ~ 1086530 (+)
G215792 NA other downstream 1012788 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1099157 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1125117 1635598 ~ 1680107 (+)

Expression


Co-expression Network