G215045


Basic Information

Item Value
gene id G215045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 548583 ~ 549057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244668
aagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagaagtgaaagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacaaagtaatactgttttatcaatagtaacagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584695

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244668 True 475 lncRNA 0.43 1 548583 549057

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 332180 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 352067 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 391506 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 576260 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 757950 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 986822 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 996200 1545257 ~ 1567659 (+)
G215009 NA non-coding upstream 38102 510216 ~ 510481 (+)
G214995 NA non-coding upstream 46861 497860 ~ 501722 (+)
G214990 NA non-coding upstream 53360 492028 ~ 495223 (+)
G214988 NA non-coding upstream 59397 488682 ~ 489186 (+)
G214987 NA non-coding upstream 60464 487471 ~ 488119 (+)
G215046 NA non-coding downstream 2662 551719 ~ 551920 (+)
G215047 NA non-coding downstream 3780 552837 ~ 553218 (+)
G215073 NA non-coding downstream 36473 585530 ~ 586141 (+)
G215084 NA non-coding downstream 54365 603422 ~ 603763 (+)
G215093 NA non-coding downstream 67173 616230 ~ 616545 (+)
G215012 NA other upstream 30396 516360 ~ 518187 (+)
G215455 NA other downstream 535385 1084442 ~ 1086530 (+)
G215792 NA other downstream 974212 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1060581 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1086541 1635598 ~ 1680107 (+)
G215830 NA other downstream 1121354 1670411 ~ 1747282 (+)

Expression


Co-expression Network