G215046


Basic Information

Item Value
gene id G215046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 551719 ~ 551920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244669
gagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaatagaagtggaagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244669 True 202 lncRNA 0.30 1 551719 551920

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 335316 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 355203 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 388643 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 573397 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 755087 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 983959 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 993337 1545257 ~ 1567659 (+)
G215045 NA non-coding upstream 2662 548583 ~ 549057 (+)
G215009 NA non-coding upstream 41238 510216 ~ 510481 (+)
G214995 NA non-coding upstream 49997 497860 ~ 501722 (+)
G214990 NA non-coding upstream 56496 492028 ~ 495223 (+)
G214988 NA non-coding upstream 62533 488682 ~ 489186 (+)
G215047 NA non-coding downstream 917 552837 ~ 553218 (+)
G215073 NA non-coding downstream 33610 585530 ~ 586141 (+)
G215084 NA non-coding downstream 51502 603422 ~ 603763 (+)
G215093 NA non-coding downstream 64310 616230 ~ 616545 (+)
G215100 NA non-coding downstream 70584 622504 ~ 623226 (+)
G215012 NA other upstream 33532 516360 ~ 518187 (+)
G215455 NA other downstream 532522 1084442 ~ 1086530 (+)
G215792 NA other downstream 971349 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1057718 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1083678 1635598 ~ 1680107 (+)
G215830 NA other downstream 1118491 1670411 ~ 1747282 (+)

Expression


Co-expression Network