G215047


Basic Information

Item Value
gene id G215047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 552837 ~ 553218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244670
gagtaatactgttttatcaacagtaacagaagtggaagagtaatactgtttcatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagaataatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagagtaatactgttttatcaacagtaacagaagtggaagagtaatactgtttcatcaacagtaacagaagtggaagagtaatactgttttatcaacagtaacagagtaatactgttttatcaatagtaacagagtaatactgtttcatca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584695

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244670 True 382 lncRNA 0.48 1 552837 553218

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 336434 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 356321 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 387345 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 572099 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 753789 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 982661 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 992039 1545257 ~ 1567659 (+)
G215046 NA non-coding upstream 917 551719 ~ 551920 (+)
G215045 NA non-coding upstream 3780 548583 ~ 549057 (+)
G215009 NA non-coding upstream 42356 510216 ~ 510481 (+)
G214995 NA non-coding upstream 51115 497860 ~ 501722 (+)
G214990 NA non-coding upstream 57614 492028 ~ 495223 (+)
G215073 NA non-coding downstream 32312 585530 ~ 586141 (+)
G215084 NA non-coding downstream 50204 603422 ~ 603763 (+)
G215093 NA non-coding downstream 63012 616230 ~ 616545 (+)
G215100 NA non-coding downstream 69286 622504 ~ 623226 (+)
G215118 NA non-coding downstream 100196 653414 ~ 653838 (+)
G215012 NA other upstream 34650 516360 ~ 518187 (+)
G215455 NA other downstream 531224 1084442 ~ 1086530 (+)
G215792 NA other downstream 970051 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 1056420 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 1082380 1635598 ~ 1680107 (+)
G215830 NA other downstream 1117193 1670411 ~ 1747282 (+)

Expression


Co-expression Network