G215229


Basic Information

Item Value
gene id G215229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 774227 ~ 774514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244921
ATGCAGAGCTACTGTATTACCACGTCTTATCCACAGTAATGTGGATGACATTACATTTCCCAGGAAATGAATTGTCACACATTGTCCCCATTCTAATGTGTTTGACTCCACATTCTGGTCAGCCATGTGAAATGAATATGAGAGAATAAACATAGTTAATGGTTGTTAGTGCTTCCCTGGCTGGCCGGTCCCTAACAGCTGGTCCTTCTGGCACCACACTCCACTCTAGCAGGCCTTAGAGATAATAAGGTCTGGTTCTGCCAACCCAGGGgctgagactgctgctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244921 True 288 lncRNA 0.46 1 774227 774514

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 557824 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 577711 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 166049 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 350803 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 532493 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 761365 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 770743 1545257 ~ 1567659 (+)
G215227 NA non-coding upstream 291 772960 ~ 773936 (+)
G215204 NA non-coding upstream 26601 745715 ~ 747626 (+)
G215198 NA non-coding upstream 38732 735261 ~ 735495 (+)
G215182 NA non-coding upstream 50283 719473 ~ 723944 (+)
G215179 NA non-coding upstream 56625 715607 ~ 717602 (+)
G215232 NA non-coding downstream 1911 776425 ~ 776632 (+)
G215244 NA non-coding downstream 11025 785539 ~ 785925 (+)
G215248 NA non-coding downstream 14739 789253 ~ 806714 (+)
G215252 NA non-coding downstream 46030 820544 ~ 820753 (+)
G215257 NA non-coding downstream 48985 823499 ~ 823718 (+)
G215012 NA other upstream 256040 516360 ~ 518187 (+)
G215455 NA other downstream 309928 1084442 ~ 1086530 (+)
G215792 NA other downstream 748755 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 835124 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 861084 1635598 ~ 1680107 (+)
G215830 NA other downstream 895897 1670411 ~ 1747282 (+)

Expression


Co-expression Network