Gene
RNA
| Item | Value |
|---|---|
| gene id | G215237 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 780774 ~ 780992 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU244929 | True | 219 | lncRNA | 0.37 | 1 | 780774 | 780992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irx2a | irx2 | coding | downstream | 265565 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 530226 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 625203 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 706221 | 63916 ~ 74553 (-) |
| LOC118964345 | NA | coding | upstream | 98008 | 879000 ~ 881031 (-) |
| LOC118936608 | hacl1 | coding | upstream | 790685 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 793372 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 802124 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 826049 | 1607041 ~ 1609598 (-) |
| G215235 | NA | non-coding | downstream | 3168 | 777330 ~ 777606 (-) |
| G215217 | NA | non-coding | downstream | 30834 | 749725 ~ 749940 (-) |
| G215180 | NA | non-coding | downstream | 63886 | 713933 ~ 716888 (-) |
| G215174 | NA | non-coding | downstream | 74436 | 705632 ~ 706338 (-) |
| G215147 | NA | non-coding | downstream | 81700 | 657702 ~ 699074 (-) |
| G215241 | NA | non-coding | upstream | 1420 | 782412 ~ 783038 (-) |
| G215246 | NA | non-coding | upstream | 5239 | 786231 ~ 786658 (-) |
| G215263 | NA | non-coding | upstream | 47153 | 828145 ~ 828548 (-) |
| G215265 | NA | non-coding | upstream | 48262 | 829254 ~ 829968 (-) |
| G215297 | NA | non-coding | upstream | 80320 | 861312 ~ 861628 (-) |
| G214982 | NA | other | downstream | 299165 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 601183 | 177723 ~ 179591 (-) |
| G215354 | NA | other | upstream | 134967 | 915959 ~ 919673 (-) |
| G215950 | NA | other | upstream | 819234 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 878088 | 1659080 ~ 1682022 (-) |
| LOC110519742 | LOC106595845 | other | upstream | 880697 | 1661660 ~ 1673583 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 1145752 | 1916571 ~ 1953363 (-) |
