G215248


Basic Information

Item Value
gene id G215248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 789253 ~ 806714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244940
gggttagacattctgatggggttaagatgggttagacattctgatggggttaagatgggttagacattctgatggggttaagatgggttagacattctgatggggttaagatgggttagacattctgatggggttaagatgggttagacattctgatggggttaaaatgggttagacagtctgatggggttaagatgggttagacattctgatggggttaagatgggttagacattctgatggggttaagatgggttagacagtctgatgggGTTCAAATGGGtgagacagtctgatggggttaagatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244940 True 309 lncRNA 0.47 2 789253 806714

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 572850 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 592737 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 133849 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 318603 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 500293 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 729165 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 738543 1545257 ~ 1567659 (+)
G215244 NA non-coding upstream 3328 785539 ~ 785925 (+)
G215232 NA non-coding upstream 12621 776425 ~ 776632 (+)
G215229 NA non-coding upstream 14739 774227 ~ 774514 (+)
G215227 NA non-coding upstream 15317 772960 ~ 773936 (+)
G215204 NA non-coding upstream 41627 745715 ~ 747626 (+)
G215252 NA non-coding downstream 13830 820544 ~ 820753 (+)
G215257 NA non-coding downstream 16785 823499 ~ 823718 (+)
G215262 NA non-coding downstream 21432 828146 ~ 828552 (+)
G215264 NA non-coding downstream 22550 829264 ~ 831735 (+)
G215296 NA non-coding downstream 54801 861515 ~ 861798 (+)
G215012 NA other upstream 271066 516360 ~ 518187 (+)
G215455 NA other downstream 277728 1084442 ~ 1086530 (+)
G215792 NA other downstream 716555 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 802924 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 828884 1635598 ~ 1680107 (+)
G215830 NA other downstream 863697 1670411 ~ 1747282 (+)

Expression


Co-expression Network