G215257


Basic Information

Item Value
gene id G215257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 823499 ~ 823718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244949
ATCCATGTGTTCACTGTCTCTGACTACAGAAGACAGAATACAAATCCTGTTGTTGGTCAGAAGGTGATGCCTGTCTGATCTGTGAAATCACATCATTATTTGGAGATGGCATGCATGTCCATGTAGATATTAAACATGATGGAAATTATGCAAAATCCAACGCAAAGTAATTCATAATGACAAAACGTAATGTCATCCCAGAAATGTGTCAGGATTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244949 True 220 lncRNA 0.59 1 823499 823718

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 607096 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 626983 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 116845 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 301599 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 483289 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 712161 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 721539 1545257 ~ 1567659 (+)
G215252 NA non-coding upstream 2746 820544 ~ 820753 (+)
G215248 NA non-coding upstream 16785 789253 ~ 806714 (+)
G215244 NA non-coding upstream 37574 785539 ~ 785925 (+)
G215232 NA non-coding upstream 46867 776425 ~ 776632 (+)
G215229 NA non-coding upstream 48985 774227 ~ 774514 (+)
G215262 NA non-coding downstream 4428 828146 ~ 828552 (+)
G215264 NA non-coding downstream 5546 829264 ~ 831735 (+)
G215296 NA non-coding downstream 37797 861515 ~ 861798 (+)
G215314 NA non-coding downstream 63826 887544 ~ 889440 (+)
G215331 NA non-coding downstream 75340 899058 ~ 899337 (+)
G215012 NA other upstream 305312 516360 ~ 518187 (+)
G215455 NA other downstream 260724 1084442 ~ 1086530 (+)
G215792 NA other downstream 699551 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 785920 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 811880 1635598 ~ 1680107 (+)
G215830 NA other downstream 846693 1670411 ~ 1747282 (+)

Expression


Co-expression Network