Gene
RNA
| Item | Value |
|---|---|
| gene id | G215265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 829254 ~ 829968 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Protein phosphatase methylesterase 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU244959 | True | 497 | lncRNA | 0.38 | 3 | 829254 | 829968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irx2a | irx2 | coding | downstream | 314045 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 578706 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 673683 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 754701 | 63916 ~ 74553 (-) |
| LOC118964345 | NA | coding | upstream | 49032 | 879000 ~ 881031 (-) |
| LOC118936608 | hacl1 | coding | upstream | 741709 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 744396 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 753148 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 777073 | 1607041 ~ 1609598 (-) |
| G215263 | NA | non-coding | downstream | 706 | 828145 ~ 828548 (-) |
| G215246 | NA | non-coding | downstream | 42596 | 786231 ~ 786658 (-) |
| G215241 | NA | non-coding | downstream | 46216 | 782412 ~ 783038 (-) |
| G215237 | NA | non-coding | downstream | 48262 | 780774 ~ 780992 (-) |
| G215235 | NA | non-coding | downstream | 51648 | 777330 ~ 777606 (-) |
| G215297 | NA | non-coding | upstream | 31344 | 861312 ~ 861628 (-) |
| G215316 | NA | non-coding | upstream | 57429 | 887397 ~ 889458 (-) |
| G215364 | NA | non-coding | upstream | 106199 | 936167 ~ 936552 (-) |
| G215384 | NA | non-coding | upstream | 107095 | 937063 ~ 995851 (-) |
| G215402 | NA | non-coding | upstream | 150706 | 980674 ~ 981454 (-) |
| G214982 | NA | other | downstream | 347645 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 649663 | 177723 ~ 179591 (-) |
| G215354 | NA | other | upstream | 85991 | 915959 ~ 919673 (-) |
| G215950 | NA | other | upstream | 770258 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 829112 | 1659080 ~ 1682022 (-) |
| LOC110519742 | LOC106595845 | other | upstream | 831721 | 1661660 ~ 1673583 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 1096776 | 1916571 ~ 1953363 (-) |
