Gene
RNA
| Item | Value |
|---|---|
| gene id | G215316 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 887397 ~ 889458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245038 | True | 774 | lncRNA | 0.41 | 3 | 887397 | 889458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 6366 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 372188 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 636849 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 731826 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 812844 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 682219 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 684906 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 693658 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 717583 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 772202 | 1661660 ~ 1673583 (-) |
| G215297 | NA | non-coding | downstream | 25769 | 861312 ~ 861628 (-) |
| G215265 | NA | non-coding | downstream | 57429 | 829254 ~ 829968 (-) |
| G215263 | NA | non-coding | downstream | 58849 | 828145 ~ 828548 (-) |
| G215246 | NA | non-coding | downstream | 100739 | 786231 ~ 786658 (-) |
| G215241 | NA | non-coding | downstream | 104359 | 782412 ~ 783038 (-) |
| G215364 | NA | non-coding | upstream | 46709 | 936167 ~ 936552 (-) |
| G215384 | NA | non-coding | upstream | 47605 | 937063 ~ 995851 (-) |
| G215402 | NA | non-coding | upstream | 91216 | 980674 ~ 981454 (-) |
| G215418 | NA | non-coding | upstream | 108999 | 998457 ~ 1006363 (-) |
| G215426 | NA | non-coding | upstream | 129600 | 1019058 ~ 1019329 (-) |
| G214982 | NA | other | downstream | 405788 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 707806 | 177723 ~ 179591 (-) |
| G215354 | NA | other | upstream | 26501 | 915959 ~ 919673 (-) |
| G215950 | NA | other | upstream | 710768 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 769622 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 1037286 | 1916571 ~ 1953363 (-) |
