G215348


Basic Information

Item Value
gene id G215348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 914550 ~ 914872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245080
ACTAATGTTAACGTAGGACTAATGTTAACATAGGACTAATGTTAACATAGTGCTAATGTTAACGCGGGATTAACGTTAACTTGGAACTAATGTTAACGTGGGAATAATGTTAACATGGGACTAATGTTAACGTAGGACTAATGTTAACATAGGACTAATGTTAACATAGGACTAATGTTAACATAGGACTAATGTTAACGTGGGACTAATGTTAACGTAGGACTAATGTTAACATAGGACTAATGTTAACGTGGGACTGGTTaaaaacatgttaataacatgttaaTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245080 True 289 lncRNA 0.39 2 914550 914872

Neighbor

gene id symbol gene type direction distance location
LOC118964344 NA coding upstream 698147 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 718034 195431 ~ 196516 (+)
irx1a LOC106593994 coding downstream 25691 940563 ~ 944831 (+)
LOC118944464 NA coding downstream 210445 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 392135 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 621007 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 630385 1545257 ~ 1567659 (+)
G215333 NA non-coding upstream 10234 901063 ~ 904316 (+)
G215331 NA non-coding upstream 15213 899058 ~ 899337 (+)
G215314 NA non-coding upstream 25110 887544 ~ 889440 (+)
G215296 NA non-coding upstream 52752 861515 ~ 861798 (+)
G215264 NA non-coding upstream 82815 829264 ~ 831735 (+)
G215356 NA non-coding downstream 9629 924501 ~ 925595 (+)
G215408 NA non-coding downstream 83572 998444 ~ 1015740 (+)
G215413 NA non-coding downstream 88827 1003699 ~ 1004571 (+)
G215416 NA non-coding downstream 94809 1009681 ~ 1012299 (+)
G215409 NA non-coding downstream 96045 1010917 ~ 1014062 (+)
G215012 NA other upstream 396363 516360 ~ 518187 (+)
G215455 NA other downstream 169570 1084442 ~ 1086530 (+)
G215792 NA other downstream 608397 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 694766 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 720726 1635598 ~ 1680107 (+)
G215830 NA other downstream 755539 1670411 ~ 1747282 (+)

Expression


Co-expression Network