Gene
RNA
| Item | Value |
|---|---|
| gene id | G215364 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 936167 ~ 936552 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245108 | True | 386 | lncRNA | 0.46 | 1 | 936167 | 936552 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 55136 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 420958 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 685619 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 780596 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 861614 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 635125 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 637812 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 646564 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 670489 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 725108 | 1661660 ~ 1673583 (-) |
| G215316 | NA | non-coding | downstream | 46709 | 887397 ~ 889458 (-) |
| G215297 | NA | non-coding | downstream | 74539 | 861312 ~ 861628 (-) |
| G215265 | NA | non-coding | downstream | 106199 | 829254 ~ 829968 (-) |
| G215263 | NA | non-coding | downstream | 107619 | 828145 ~ 828548 (-) |
| G215246 | NA | non-coding | downstream | 149509 | 786231 ~ 786658 (-) |
| G215384 | NA | non-coding | upstream | 511 | 937063 ~ 995851 (-) |
| G215402 | NA | non-coding | upstream | 44122 | 980674 ~ 981454 (-) |
| G215418 | NA | non-coding | upstream | 61905 | 998457 ~ 1006363 (-) |
| G215426 | NA | non-coding | upstream | 82506 | 1019058 ~ 1019329 (-) |
| G215429 | NA | non-coding | upstream | 84019 | 1020571 ~ 1021384 (-) |
| G215354 | NA | other | downstream | 16494 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 454558 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 756576 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 663674 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 722528 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 990192 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 1121363 | 2057915 ~ 2058429 (-) |
