Gene
RNA
| Item | Value |
|---|---|
| gene id | G215418 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 998457 ~ 1006363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245179 | True | 505 | lncRNA | 0.46 | 2 | 998457 | 1006363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 117426 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 483248 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 747909 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 842886 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 923904 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 565314 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 568001 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 576753 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 600678 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 655297 | 1661660 ~ 1673583 (-) |
| G215384 | NA | non-coding | downstream | 2606 | 937063 ~ 995851 (-) |
| G215402 | NA | non-coding | downstream | 17003 | 980674 ~ 981454 (-) |
| G215364 | NA | non-coding | downstream | 61905 | 936167 ~ 936552 (-) |
| G215316 | NA | non-coding | downstream | 108999 | 887397 ~ 889458 (-) |
| G215297 | NA | non-coding | downstream | 136829 | 861312 ~ 861628 (-) |
| G215426 | NA | non-coding | upstream | 12695 | 1019058 ~ 1019329 (-) |
| G215429 | NA | non-coding | upstream | 14208 | 1020571 ~ 1021384 (-) |
| G215431 | NA | non-coding | upstream | 19643 | 1026006 ~ 1027291 (-) |
| G215608 | NA | non-coding | upstream | 45912 | 1052275 ~ 1053216 (-) |
| G215617 | NA | non-coding | upstream | 64951 | 1071314 ~ 1072096 (-) |
| G215354 | NA | other | downstream | 78784 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 516848 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 818866 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 593863 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 652717 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 920381 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 1051552 | 2057915 ~ 2058429 (-) |
