G215413


Basic Information

Item Value
gene id G215413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1003699 ~ 1004571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245173
tgtattccctgggacaatatggtGATGTGTTGTactttattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtattgtactgtattccatgggacaatatgctgatgtgttgtaatgtattcccttggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtact

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245173 True 696 lncRNA 0.37 2 1003699 1004571

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 58868 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 787296 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 807183 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 120746 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 302436 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 531308 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 540686 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 605133 1609704 ~ 1611504 (+)
G215356 NA non-coding upstream 78104 924501 ~ 925595 (+)
G215348 NA non-coding upstream 88827 914550 ~ 914872 (+)
G215333 NA non-coding upstream 99383 901063 ~ 904316 (+)
G215331 NA non-coding upstream 104362 899058 ~ 899337 (+)
G215314 NA non-coding upstream 114259 887544 ~ 889440 (+)
G215416 NA non-coding downstream 5110 1009681 ~ 1012299 (+)
G215409 NA non-coding downstream 6346 1010917 ~ 1014062 (+)
G215410 NA non-coding downstream 9695 1014266 ~ 1014868 (+)
G215427 NA non-coding downstream 15427 1019998 ~ 1020270 (+)
G215428 NA non-coding downstream 16477 1021048 ~ 1021389 (+)
G215012 NA other upstream 485512 516360 ~ 518187 (+)
G215455 NA other downstream 79871 1084442 ~ 1086530 (+)
G215792 NA other downstream 518698 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 605067 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 631027 1635598 ~ 1680107 (+)
G215830 NA other downstream 665840 1670411 ~ 1747282 (+)

Expression


Co-expression Network