G215410


Basic Information

Item Value
gene id G215410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1014266 ~ 1014868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245169
gatgtgttgtactgtattccctgtgacaatatgctgatgtgttgtactgtattccatgggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtattgtactgtattccatgggacaatatgatgatgtgttgtactgtattccctgggacaatatgctggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtactgtattcccagggacaatatgctgatgtgttgtactgtattccctgggacaatatgctgatgtgttgtattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245169 True 306 lncRNA 0.40 2 1014266 1014868

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 69435 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 797863 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 817750 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 110449 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 292139 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 521011 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 530389 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 594836 1609704 ~ 1611504 (+)
G215409 NA non-coding upstream 204 1010917 ~ 1014062 (+)
G215416 NA non-coding upstream 1967 1009681 ~ 1012299 (+)
G215413 NA non-coding upstream 9695 1003699 ~ 1004571 (+)
G215356 NA non-coding upstream 88671 924501 ~ 925595 (+)
G215348 NA non-coding upstream 99394 914550 ~ 914872 (+)
G215427 NA non-coding downstream 5130 1019998 ~ 1020270 (+)
G215428 NA non-coding downstream 6180 1021048 ~ 1021389 (+)
G215436 NA non-coding downstream 19053 1033921 ~ 1458208 (+)
G215444 NA non-coding downstream 41013 1055881 ~ 1057198 (+)
G215445 NA non-coding downstream 45978 1060846 ~ 1061547 (+)
G215012 NA other upstream 496079 516360 ~ 518187 (+)
G215455 NA other downstream 69574 1084442 ~ 1086530 (+)
G215792 NA other downstream 508401 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 594770 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 620730 1635598 ~ 1680107 (+)
G215830 NA other downstream 655543 1670411 ~ 1747282 (+)

Expression


Co-expression Network