G215427


Basic Information

Item Value
gene id G215427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1019998 ~ 1020270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245192
GGTTCATTATACAAACCAGCAGTGTGGCTGTACGCTGTCGAGGCTGACGGCATTCTGGTTCATTATACAAACCAGCAGTGTGGCTGTACGCTGTCGAGGCTGACGGCATTCTGGTTCATTATACAAACCAGCAGTGTGGCTGTACGCTGTCGAGGCTGACGGCATTCTGGTTCATTATACAAACCAGCAGTGTGGCTGTACGCTGTCGAGGCTGACGGCATTCTGGTTTACTATACAAACCAGCAGTGTGGCTGTACGCTGTCGAGGCTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245192 True 273 lncRNA 0.52 1 1019998 1020270

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 75167 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 803595 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 823482 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 105047 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 286737 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 515609 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 524987 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 589434 1609704 ~ 1611504 (+)
G215408 NA non-coding upstream 4258 998444 ~ 1015740 (+)
G215410 NA non-coding upstream 5130 1014266 ~ 1014868 (+)
G215409 NA non-coding upstream 5936 1010917 ~ 1014062 (+)
G215416 NA non-coding upstream 7699 1009681 ~ 1012299 (+)
G215413 NA non-coding upstream 15427 1003699 ~ 1004571 (+)
G215428 NA non-coding downstream 778 1021048 ~ 1021389 (+)
G215436 NA non-coding downstream 13651 1033921 ~ 1458208 (+)
G215444 NA non-coding downstream 35611 1055881 ~ 1057198 (+)
G215445 NA non-coding downstream 40576 1060846 ~ 1061547 (+)
G215446 NA non-coding downstream 41430 1061700 ~ 1062185 (+)
G215012 NA other upstream 501811 516360 ~ 518187 (+)
G215455 NA other downstream 64172 1084442 ~ 1086530 (+)
G215792 NA other downstream 502999 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 589368 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 615328 1635598 ~ 1680107 (+)
G215830 NA other downstream 650141 1670411 ~ 1747282 (+)

Expression


Co-expression Network