G215428


Basic Information

Item Value
gene id G215428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1021048 ~ 1021389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245193
ACGGGAGAATTCACTTATGTTTAAATAATGGTGTTTAAACGGTAGAAATTAATCTTAATGTGAAGTCACATCTGAAGGTGTGAAGGGTTCTGGTTTGGATTTGACACAGTGCAGGTTGGTGGGTTTGATTTGACACCATGCAGGGTTCTGGTTTGATTTGACACCACGGAGGGTTGTGGTTTTGTTTCTGAGCAAGGAAGACTGAAGAGAGAATAAGTTGTGCAAGGCATAAAACATAGACCTTAGAGAGAATAAGTTGTGCAAGGCATAAAACATAGACCTTAGAGAGAATAAGTTGTGCAAGGCATAAAACATAGACCTTAGAGAGAATAAGTTGTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245193 True 342 lncRNA 0.39 1 1021048 1021389

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 76217 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 804645 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 824532 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 103928 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 285618 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 514490 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 523868 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 588315 1609704 ~ 1611504 (+)
G215427 NA non-coding upstream 778 1019998 ~ 1020270 (+)
G215408 NA non-coding upstream 5308 998444 ~ 1015740 (+)
G215410 NA non-coding upstream 6180 1014266 ~ 1014868 (+)
G215409 NA non-coding upstream 6986 1010917 ~ 1014062 (+)
G215416 NA non-coding upstream 8749 1009681 ~ 1012299 (+)
G215436 NA non-coding downstream 12532 1033921 ~ 1458208 (+)
G215444 NA non-coding downstream 34492 1055881 ~ 1057198 (+)
G215445 NA non-coding downstream 39457 1060846 ~ 1061547 (+)
G215446 NA non-coding downstream 40311 1061700 ~ 1062185 (+)
G215448 NA non-coding downstream 42791 1064180 ~ 1066123 (+)
G215012 NA other upstream 502861 516360 ~ 518187 (+)
G215455 NA other downstream 63053 1084442 ~ 1086530 (+)
G215792 NA other downstream 501880 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 588249 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 614209 1635598 ~ 1680107 (+)
G215830 NA other downstream 649022 1670411 ~ 1747282 (+)

Expression


Co-expression Network