G215431


Basic Information

Item Value
gene id G215431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1026006 ~ 1027291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245196
ACTGTCAACCTTGCAGCCTTTCCTTCTGCCACAACTCCCCTTCTCAAACATCTATACATAAACATGTGCTGTAGAGTGATGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTACTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGACCTCGATGGGTCATTACTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGACCTCGATGGGTCATTACTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGAACTCGATGGGTCATTGCTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGACCTCGATGGGTCATTACTGTAGAGTGCTGTAGTGTATTCTCACACAGAGGTGACCTCGATGGGTCATTGCTGGAGAGTGCTGTAGTGTATTCTCACACAGCCTATTAGACCAGTGTATTATACTGGTTGTTTATAGCTGCTTAGACCAGTGTATTATACTGGTTGTTGTTTATAGCTGTTTAGACCCGTGTATTATACTGGTTGTTTATAGCTGCTTAGACCAGTGTATTATACTGGTTGTTTTTTATAGCTGCTTAGACCAGTGTATTATACTGGTTGTTTATAGCTGCTTAGACCAGTGTATTACAGTGGTTGTTGAGAGCTGCTTAGACCAGTGTATTATACTGGTTGTTGTTTATAGCTGCTTAGACCAGTGTATTATACTGGTTGTTGTTTATAGCTGCTTAGACCAGTGTATTATACTGGTTGTTTATAGCTGTTAAGACCAGTGTATTATACTGGTTGTTTATAGCTGCTTAGACCAGTAGTTTGGGTCTGGTCTACAGTCAGTAATGTGGTAGTTTAGGTCTGGTCTACAGTCAGTAATGTGGTAGTTTAGGTCTGGTCTACAGTCAGTAATGTGGTAGTTTAGGTCTGGTCTACAGTCAGTAATGTGGTAGTTTAGGTCTGGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584648

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245196 True 1214 lncRNA 0.43 3 1026006 1027291

Neighbor

gene id symbol gene type direction distance location
LOC118964345 NA coding downstream 144975 879000 ~ 881031 (-)
irx2a irx2 coding downstream 510797 510967 ~ 515209 (-)
LOC118944729 NA coding downstream 775458 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 870435 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 951453 63916 ~ 74553 (-)
LOC118936608 hacl1 coding upstream 544386 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 547073 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 555825 1583116 ~ 1593615 (-)
LOC118944737 NA coding upstream 579750 1607041 ~ 1609598 (-)
LOC110519742 LOC106595845 coding upstream 634369 1661660 ~ 1673583 (-)
G215429 NA non-coding downstream 4622 1020571 ~ 1021384 (-)
G215426 NA non-coding downstream 6677 1019058 ~ 1019329 (-)
G215418 NA non-coding downstream 19643 998457 ~ 1006363 (-)
G215384 NA non-coding downstream 30155 937063 ~ 995851 (-)
G215402 NA non-coding downstream 44552 980674 ~ 981454 (-)
G215608 NA non-coding upstream 24984 1052275 ~ 1053216 (-)
G215617 NA non-coding upstream 44023 1071314 ~ 1072096 (-)
G215622 NA non-coding upstream 57132 1084423 ~ 1086521 (-)
G215629 NA non-coding upstream 79831 1107122 ~ 1107668 (-)
G215649 NA non-coding upstream 107987 1135278 ~ 1135819 (-)
G215354 NA other downstream 106333 915959 ~ 919673 (-)
G214982 NA other downstream 544397 481047 ~ 481609 (-)
G214663 NA other downstream 846415 177723 ~ 179591 (-)
G215950 NA other upstream 572935 1600226 ~ 1618140 (-)
G215956 NA other upstream 631789 1659080 ~ 1682022 (-)
LOC110516567 LOC106595628 other upstream 899453 1916571 ~ 1953363 (-)
G216038 NA other upstream 1030624 2057915 ~ 2058429 (-)

Expression


Co-expression Network