G215436


Basic Information

Item Value
gene id G215436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1033921 ~ 1458208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245202
tgagtcaatgataacatggctatatacactgggtaccagtactgagtcaatgataacatggctatatacactgggtaccagtactgagtcaatgataacatggctatatacactgggtaccagtactgagtcaatgtgcaggggtaccaggtaattgaggtagatgtgtacataTAGATAGGGATACAATGACAAGGCAACAGGATAgaaaataaacagtagcagcagtatactgtaggtagggataaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtgtactgtaggtaggggtaaaggatagataatagacagtagcagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245202 True 673 lncRNA 0.39 4 1033921 1458208

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 89090 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 817518 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 837405 195431 ~ 196516 (+)
LOC118944733 plekha8 coding downstream 77671 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 87049 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 151496 1609704 ~ 1611504 (+)
LOC118944466 LOC100136727 coding downstream 157338 1615546 ~ 1618046 (+)
LOC118964347 LOC100136727 coding downstream 163949 1622157 ~ 1626290 (+)
G215428 NA non-coding upstream 12532 1021048 ~ 1021389 (+)
G215427 NA non-coding upstream 13651 1019998 ~ 1020270 (+)
G215410 NA non-coding upstream 19053 1014266 ~ 1014868 (+)
G215409 NA non-coding upstream 19859 1010917 ~ 1014062 (+)
G215416 NA non-coding upstream 21622 1009681 ~ 1012299 (+)
G215777 NA non-coding downstream 19910 1478118 ~ 1480022 (+)
G215778 NA non-coding downstream 21862 1480070 ~ 1480308 (+)
G215782 NA non-coding downstream 23801 1482009 ~ 1483294 (+)
G215792 NA non-coding downstream 31144 1489352 ~ 1577030 (+)
G215795 NA non-coding downstream 33729 1491937 ~ 1494559 (+)
G215012 NA other upstream 515734 516360 ~ 518187 (+)
G215820 LOC100136727 other downstream 151430 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 177390 1635598 ~ 1680107 (+)
G215830 NA other downstream 212203 1670411 ~ 1747282 (+)
G215843 LOC100136727 other downstream 346180 1804388 ~ 1805255 (+)

Expression


Co-expression Network