Gene
RNA
| Item | Value |
|---|---|
| gene id | G215608 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1052275 ~ 1053216 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245447 | False | 239 | lncRNA | 0.45 | 2 | 1052275 | 1053216 |
| TU245446 | True | 249 | lncRNA | 0.39 | 2 | 1052579 | 1053216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 171244 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 537066 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 801727 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 896704 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 977722 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 518461 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 521148 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 529900 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 553825 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 608444 | 1661660 ~ 1673583 (-) |
| G215431 | NA | non-coding | downstream | 24984 | 1026006 ~ 1027291 (-) |
| G215429 | NA | non-coding | downstream | 30891 | 1020571 ~ 1021384 (-) |
| G215426 | NA | non-coding | downstream | 32946 | 1019058 ~ 1019329 (-) |
| G215418 | NA | non-coding | downstream | 45912 | 998457 ~ 1006363 (-) |
| G215384 | NA | non-coding | downstream | 56424 | 937063 ~ 995851 (-) |
| G215617 | NA | non-coding | upstream | 18098 | 1071314 ~ 1072096 (-) |
| G215622 | NA | non-coding | upstream | 31207 | 1084423 ~ 1086521 (-) |
| G215629 | NA | non-coding | upstream | 53906 | 1107122 ~ 1107668 (-) |
| G215649 | NA | non-coding | upstream | 82062 | 1135278 ~ 1135819 (-) |
| G215668 | NA | non-coding | upstream | 128548 | 1181764 ~ 1182345 (-) |
| G215354 | NA | other | downstream | 132602 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 570666 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 872684 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 547010 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 605864 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 873528 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 1004699 | 2057915 ~ 2058429 (-) |
