G215448


Basic Information

Item Value
gene id G215448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1064180 ~ 1066123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245220
GGTTCAAATTTACATTTAGTTTGAAACTACTGATACTACTTACGTTGTAGTTAGTGCTGCTAACGgacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacattgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggatgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaacactgctaaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtactgtagttaacactgataaaggatgttgtagttaacactgataaaggacgttgtagttaacactgctaaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaa
>TU245221
gataaaggacgttgtagttaacactgataaaggatgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtactgtagttaacactgataaaggatgttgtagttaacactgataaaggacgttgtagttaacactgctaaaggacgttgtagttaacactgataaaggacgttgtagttaacactgataaaggacgttgtagttaa

Function

NR:

description
PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245220 False 484 lncRNA 0.30 2 1064180 1066123
TU245221 True 251 lncRNA 0.42 2 1065393 1066123

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 119349 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 847777 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 867664 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 59194 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 240884 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 469756 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 479134 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 543581 1609704 ~ 1611504 (+)
G215446 NA non-coding upstream 1995 1061700 ~ 1062185 (+)
G215445 NA non-coding upstream 2633 1060846 ~ 1061547 (+)
G215444 NA non-coding upstream 6982 1055881 ~ 1057198 (+)
G215428 NA non-coding upstream 42791 1021048 ~ 1021389 (+)
G215427 NA non-coding upstream 43910 1019998 ~ 1020270 (+)
G215452 NA non-coding downstream 5277 1071400 ~ 1072095 (+)
G215463 NA non-coding downstream 43323 1109446 ~ 1109841 (+)
G215491 NA non-coding downstream 88255 1154378 ~ 1155885 (+)
G215528 NA non-coding downstream 198424 1264547 ~ 1265314 (+)
G215012 NA other upstream 545993 516360 ~ 518187 (+)
G215455 NA other downstream 18319 1084442 ~ 1086530 (+)
G215792 NA other downstream 457146 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 543515 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 569475 1635598 ~ 1680107 (+)
G215830 NA other downstream 604288 1670411 ~ 1747282 (+)

Expression


Co-expression Network