G215622


Basic Information

Item Value
gene id G215622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1084423 ~ 1086521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245467
actattaatatacagataataccactactattaatatacagataataccactactattaatatacagataataccactactattcatatacagataatactaacataccactactattaaTTTACAGATACATCTGATGGACAGAATGTCTGCTCTTCGCCATCTGTGTTCAACATGGTCTGATATACAGAATGTCTGCTCTTCTACCATCTGTATTCAACATGGTCTGATGGACATAAAGTCTGCTTCAATCTGTATTCAACATGGTCTGATGGACATAAAGTCTGCTTCAATCTGTATTCAACATGGTCTGAAGACAGAATGTCTGCCCTTCTAGCATCTGTATTCAACATGGTCTGATGGACATAAAGTCTGCTTCAATCTGTATTCAACATGGTCTGATGGACATAAAGTCTGCTTCAATCTGTATTCAACATGGTCTGAAGACAGAATGTCTGCCCTTCTAGCATCTGTATTCAACATGGTCTGATGGACATAAAGTCTGCTTCAATCTGTATTCAACATGGTCTGATAGGCAGAAAGTCTGCTTCCATCTGTATTCAACATGGTCTGGTAGACATAATGTCTGCCCTTCTAGCATCTGTATTCAACATGGTCTGATAGACAGAATGTCTGCTCTTCTCCCAACTGTATTTAACATGGTCTGGTAGACATAATGTCTGCTCTTCTCCCATCTGTATTCAACATGGTCTGACAGACAGAATGTCTGCTCTTCTCCCAACTGTATTCAACATGGTCAGGTAGACAGAATGTCTGCTCTTCTACAATCTGTATTCAACATGGTCTGGTAGACAGAATGTCTGCTCTTCTACAATCTGTATTCAACATGGTCTGGTAGACAGAATGTCTGCTCTTCTACCATCTGTATTCAACATGGTCTGGTAGACAGAATGTATGCTCAACAGACCCTGTTGACTACAGATGGTTAGAAGAGCAGACATTCTGTCTACTAGACCATGTTGAATACAGTTGGTAAGAAGAGCAGACGTTCTGTCTACCAGACCATGTTGAATACAGATTGTAGAAGAGCAGACATTCTGTCTACCTGACCATGTTGAATACAGATGGTAGAAGAGCAGACATTATGTCTACCAGACCATGTTAAATACAGTTGGGAGAAGAGCAGACATTCTGTCTACCAGACCATGTTGAATACAGATGGAAGAAGAGCAGACATTCTGTCTATCAGACCATGTTGAATACAGATGGGAGAAGAGCAGACATTCTGTCTATCAGACCATGTTGAATACAGATGGTAGAAGCCCAGTCAGTGCAGCTGAGAAGTGATGAAGGCCGTAGAGAATATAGGTTGAGATTCATTCCTGTTCTAAATGATTAACAGGACGATTTCTCCTCCAACAAATGACTGAGGTTGTCGGCAAGGTGTTGATACAGGCAGCACATTTAGCTCTGGACAGGGAAGCTAATTTGCCTGTGATCAATTAACACAGACAAGGTGTAGCAACTCTGTTTCTAGTTCAGCAGCCTTTTGTGCCTCCCCATGAGCACTAATCATGTCCTCCGTGGGCTTCAGAGGGCTGCAGACTGCAGCAGGACTGAGGGGATGGATTTAGCCTCCAGACTCTCCTCAGGCCATAGTCTGACAAGTCAAACCGTCCCAGGCAAACTAATCTAGCTCTGGGACACCAGCTCCACATGAAAGACAGCTACACATTACTATTGGTGGAAAAAGTGTCATTTTAAATTCACCTCTTGTCAACGGCTGACGGGTTGAGAATCACAAATGAGCTGCTCATTTCTCTTTGTCTAACAGCAgaaaatactgtactgtatataatcactacagataatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245467 True 1835 lncRNA 0.41 3 1084423 1086521

Neighbor

gene id symbol gene type direction distance location
LOC118964345 NA coding downstream 203392 879000 ~ 881031 (-)
irx2a irx2 coding downstream 569214 510967 ~ 515209 (-)
LOC118944729 NA coding downstream 833875 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 928852 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 1009870 63916 ~ 74553 (-)
LOC118936608 hacl1 coding upstream 485156 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 487843 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 496595 1583116 ~ 1593615 (-)
LOC118944737 NA coding upstream 520520 1607041 ~ 1609598 (-)
LOC110519742 LOC106595845 coding upstream 575139 1661660 ~ 1673583 (-)
G215617 NA non-coding downstream 12327 1071314 ~ 1072096 (-)
G215608 NA non-coding downstream 31207 1052275 ~ 1053216 (-)
G215431 NA non-coding downstream 57132 1026006 ~ 1027291 (-)
G215429 NA non-coding downstream 63039 1020571 ~ 1021384 (-)
G215426 NA non-coding downstream 65094 1019058 ~ 1019329 (-)
G215629 NA non-coding upstream 20601 1107122 ~ 1107668 (-)
G215649 NA non-coding upstream 48757 1135278 ~ 1135819 (-)
G215668 NA non-coding upstream 95243 1181764 ~ 1182345 (-)
G215714 NA non-coding upstream 237330 1323851 ~ 1324117 (-)
G215718 NA non-coding upstream 246848 1333369 ~ 1351882 (-)
G215354 NA other downstream 164750 915959 ~ 919673 (-)
G214982 NA other downstream 602814 481047 ~ 481609 (-)
G214663 NA other downstream 904832 177723 ~ 179591 (-)
G215950 NA other upstream 513705 1600226 ~ 1618140 (-)
G215956 NA other upstream 572559 1659080 ~ 1682022 (-)
LOC110516567 LOC106595628 other upstream 840223 1916571 ~ 1953363 (-)
G216038 NA other upstream 971394 2057915 ~ 2058429 (-)

Expression


Co-expression Network