G215463


Basic Information

Item Value
gene id G215463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1109446 ~ 1109841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245243
CCAACCTATCATAGCCATTTGTAGTTCCGCCAACCTATCATAGCCATTTGTAGTTCCGCCAACCTATCATAGCCATTTGTAGTTCAGCCAACCTATCATAGCCATTTGCAGGTTCACAAATCTATCATAGCCATTTGCAGGTTCACAAACCTATCATAGCCATTTGCAGGTTCACAAACCTATCATAGCCATTTGCAGGTTCACAAACCTATCATAGCCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245243 True 222 lncRNA 0.41 2 1109446 1109841

Neighbor

gene id symbol gene type direction distance location
irx1a LOC106593994 coding upstream 164615 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 893043 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 912930 195431 ~ 196516 (+)
LOC118944464 NA coding downstream 15476 1125317 ~ 1130309 (+)
LOC118944732 NA coding downstream 197166 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 426038 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 435416 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 499863 1609704 ~ 1611504 (+)
G215452 NA non-coding upstream 37351 1071400 ~ 1072095 (+)
G215448 NA non-coding upstream 43323 1064180 ~ 1066123 (+)
G215446 NA non-coding upstream 47261 1061700 ~ 1062185 (+)
G215445 NA non-coding upstream 47899 1060846 ~ 1061547 (+)
G215444 NA non-coding upstream 52248 1055881 ~ 1057198 (+)
G215491 NA non-coding downstream 44537 1154378 ~ 1155885 (+)
G215528 NA non-coding downstream 154706 1264547 ~ 1265314 (+)
G215531 NA non-coding downstream 175955 1285796 ~ 1286520 (+)
G215544 NA non-coding downstream 200513 1310354 ~ 1311062 (+)
G215455 NA other upstream 22916 1084442 ~ 1086530 (+)
G215012 NA other upstream 591259 516360 ~ 518187 (+)
G215792 NA other downstream 413428 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 499797 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 525757 1635598 ~ 1680107 (+)
G215830 NA other downstream 560570 1670411 ~ 1747282 (+)
G215843 LOC100136727 other downstream 694547 1804388 ~ 1805255 (+)

Expression


Co-expression Network