Gene
RNA
| Item | Value |
|---|---|
| gene id | G215491 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1154378 ~ 1155885 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245279 | True | 298 | lncRNA | 0.43 | 2 | 1154378 | 1155885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944464 | NA | coding | upstream | 25606 | 1125317 ~ 1130309 (+) |
| irx1a | LOC106593994 | coding | upstream | 209547 | 940563 ~ 944831 (+) |
| LOC118964344 | NA | coding | upstream | 937975 | 213740 ~ 216403 (+) |
| LOC118964343 | NA | coding | upstream | 957862 | 195431 ~ 196516 (+) |
| LOC118944732 | NA | coding | downstream | 151122 | 1307007 ~ 1309337 (+) |
| LOC118944733 | plekha8 | coding | downstream | 379994 | 1535879 ~ 1538143 (+) |
| LOC118964346 | LOC106597212 | coding | downstream | 389372 | 1545257 ~ 1567659 (+) |
| LOC118944738 | LOC100136727 | coding | downstream | 453819 | 1609704 ~ 1611504 (+) |
| LOC118944466 | LOC100136727 | coding | downstream | 459661 | 1615546 ~ 1618046 (+) |
| G215463 | NA | non-coding | upstream | 44537 | 1109446 ~ 1109841 (+) |
| G215452 | NA | non-coding | upstream | 82283 | 1071400 ~ 1072095 (+) |
| G215448 | NA | non-coding | upstream | 88255 | 1064180 ~ 1066123 (+) |
| G215446 | NA | non-coding | upstream | 92193 | 1061700 ~ 1062185 (+) |
| G215528 | NA | non-coding | downstream | 108662 | 1264547 ~ 1265314 (+) |
| G215531 | NA | non-coding | downstream | 129911 | 1285796 ~ 1286520 (+) |
| G215544 | NA | non-coding | downstream | 154469 | 1310354 ~ 1311062 (+) |
| G215555 | NA | non-coding | downstream | 203497 | 1359382 ~ 1361280 (+) |
| G215560 | NA | non-coding | downstream | 220029 | 1375914 ~ 1405461 (+) |
| G215455 | NA | other | upstream | 67848 | 1084442 ~ 1086530 (+) |
| G215012 | NA | other | upstream | 636191 | 516360 ~ 518187 (+) |
| G215792 | NA | other | downstream | 367384 | 1489352 ~ 1577030 (+) |
| G215820 | LOC100136727 | other | downstream | 453753 | 1609638 ~ 1616379 (+) |
| LOC118944469 | LOC100136727 | other | downstream | 479713 | 1635598 ~ 1680107 (+) |
| G215830 | NA | other | downstream | 514526 | 1670411 ~ 1747282 (+) |
| G215843 | LOC100136727 | other | downstream | 648503 | 1804388 ~ 1805255 (+) |
