G215531


Basic Information

Item Value
gene id G215531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1285796 ~ 1286520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245327
ATTGTAGGGTAAACACATTCATTCATATTGTCAGGTATTGTAGGGTGAACACATTAATTCATATTGTCTGGTATTGTAGGGTAAACACATTCATTCATATTGTGTGGTATTGTAGGGTGAACACATTAATTCATATTGTGTGGTATTGTAGGGTGAACATATTAATTCATATTGTGTGGTATTGTAGGGTGAACACATTAATTCATATTGTGTGGTATTGAAGGGTGAACACATTAATTCATATTGTGTGGTAT

Function

NR:

description
putative threonine-rich GPI-anchored glycoprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245327 True 254 lncRNA 0.41 3 1285796 1286520

Neighbor

gene id symbol gene type direction distance location
LOC118944464 NA coding upstream 157024 1125317 ~ 1130309 (+)
irx1a LOC106593994 coding upstream 340965 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 1069393 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 1089280 195431 ~ 196516 (+)
LOC118944732 NA coding downstream 20487 1307007 ~ 1309337 (+)
LOC118944733 plekha8 coding downstream 249359 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 258737 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 323184 1609704 ~ 1611504 (+)
LOC118944466 LOC100136727 coding downstream 329026 1615546 ~ 1618046 (+)
G215528 NA non-coding upstream 20482 1264547 ~ 1265314 (+)
G215491 NA non-coding upstream 129911 1154378 ~ 1155885 (+)
G215463 NA non-coding upstream 175955 1109446 ~ 1109841 (+)
G215452 NA non-coding upstream 213701 1071400 ~ 1072095 (+)
G215544 NA non-coding downstream 23834 1310354 ~ 1311062 (+)
G215555 NA non-coding downstream 72862 1359382 ~ 1361280 (+)
G215560 NA non-coding downstream 89394 1375914 ~ 1405461 (+)
G215575 NA non-coding downstream 122011 1408531 ~ 1418926 (+)
G215582 NA non-coding downstream 141676 1428196 ~ 1431723 (+)
G215455 NA other upstream 199266 1084442 ~ 1086530 (+)
G215012 NA other upstream 767609 516360 ~ 518187 (+)
G215792 NA other downstream 236749 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 323118 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 349078 1635598 ~ 1680107 (+)
G215830 NA other downstream 383891 1670411 ~ 1747282 (+)
G215843 LOC100136727 other downstream 517868 1804388 ~ 1805255 (+)

Expression


Co-expression Network