G215544


Basic Information

Item Value
gene id G215544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1310354 ~ 1311062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245348
CCCTAGATCAACTCTAGATCAACCCTAGATCATCCCTAGATCACAACATGATGCACTAATAAAAGCCCTAGATCAGCCCTAGATCAACCCTAGATCAACCCTAGATCATCCCTAGATCAAAACATGATGCACTAATAAAAGCCCTAGATCAGCCCTAGATCAACTCTAGATCAACCCTAGATCAACTCTAGATCAGCCCTAGATCAACCCTAGATCAACCCTAGATCAACCCTAGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245348 True 239 lncRNA 0.48 3 1310354 1311062

Neighbor

gene id symbol gene type direction distance location
LOC118944732 NA coding upstream 1017 1307007 ~ 1309337 (+)
LOC118944464 NA coding upstream 181582 1125317 ~ 1130309 (+)
irx1a LOC106593994 coding upstream 365523 940563 ~ 944831 (+)
LOC118964344 NA coding upstream 1093951 213740 ~ 216403 (+)
LOC118964343 NA coding upstream 1113838 195431 ~ 196516 (+)
LOC118944733 plekha8 coding downstream 224817 1535879 ~ 1538143 (+)
LOC118964346 LOC106597212 coding downstream 234195 1545257 ~ 1567659 (+)
LOC118944738 LOC100136727 coding downstream 298642 1609704 ~ 1611504 (+)
LOC118944466 LOC100136727 coding downstream 304484 1615546 ~ 1618046 (+)
LOC118964347 LOC100136727 coding downstream 311095 1622157 ~ 1626290 (+)
G215531 NA non-coding upstream 23834 1285796 ~ 1286520 (+)
G215528 NA non-coding upstream 45040 1264547 ~ 1265314 (+)
G215491 NA non-coding upstream 154469 1154378 ~ 1155885 (+)
G215463 NA non-coding upstream 200513 1109446 ~ 1109841 (+)
G215555 NA non-coding downstream 48320 1359382 ~ 1361280 (+)
G215560 NA non-coding downstream 64852 1375914 ~ 1405461 (+)
G215575 NA non-coding downstream 97469 1408531 ~ 1418926 (+)
G215582 NA non-coding downstream 117134 1428196 ~ 1431723 (+)
G215591 NA non-coding downstream 133259 1444321 ~ 1448803 (+)
G215455 NA other upstream 223824 1084442 ~ 1086530 (+)
G215012 NA other upstream 792167 516360 ~ 518187 (+)
G215792 NA other downstream 212207 1489352 ~ 1577030 (+)
G215820 LOC100136727 other downstream 298576 1609638 ~ 1616379 (+)
LOC118944469 LOC100136727 other downstream 324536 1635598 ~ 1680107 (+)
G215830 NA other downstream 359349 1670411 ~ 1747282 (+)
G215843 LOC100136727 other downstream 493326 1804388 ~ 1805255 (+)

Expression


Co-expression Network