Gene
RNA
| Item | Value |
|---|---|
| gene id | G215560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1375914 ~ 1405461 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245387 | False | 418 | lncRNA | 0.54 | 3 | 1375914 | 1405461 |
| TU245383 | True | 418 | lncRNA | 0.33 | 2 | 1404691 | 1405461 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944732 | NA | coding | upstream | 66577 | 1307007 ~ 1309337 (+) |
| LOC118944464 | NA | coding | upstream | 247142 | 1125317 ~ 1130309 (+) |
| irx1a | LOC106593994 | coding | upstream | 431083 | 940563 ~ 944831 (+) |
| LOC118964344 | NA | coding | upstream | 1159511 | 213740 ~ 216403 (+) |
| LOC118964343 | NA | coding | upstream | 1179398 | 195431 ~ 196516 (+) |
| LOC118944733 | plekha8 | coding | downstream | 130418 | 1535879 ~ 1538143 (+) |
| LOC118964346 | LOC106597212 | coding | downstream | 139796 | 1545257 ~ 1567659 (+) |
| LOC118944738 | LOC100136727 | coding | downstream | 204243 | 1609704 ~ 1611504 (+) |
| LOC118944466 | LOC100136727 | coding | downstream | 210085 | 1615546 ~ 1618046 (+) |
| LOC118964347 | LOC100136727 | coding | downstream | 216696 | 1622157 ~ 1626290 (+) |
| G215555 | NA | non-coding | upstream | 14634 | 1359382 ~ 1361280 (+) |
| G215544 | NA | non-coding | upstream | 64852 | 1310354 ~ 1311062 (+) |
| G215531 | NA | non-coding | upstream | 89394 | 1285796 ~ 1286520 (+) |
| G215528 | NA | non-coding | upstream | 110600 | 1264547 ~ 1265314 (+) |
| G215491 | NA | non-coding | upstream | 220029 | 1154378 ~ 1155885 (+) |
| G215575 | NA | non-coding | downstream | 3070 | 1408531 ~ 1418926 (+) |
| G215582 | NA | non-coding | downstream | 22735 | 1428196 ~ 1431723 (+) |
| G215591 | NA | non-coding | downstream | 38860 | 1444321 ~ 1448803 (+) |
| G215777 | NA | non-coding | downstream | 72657 | 1478118 ~ 1480022 (+) |
| G215778 | NA | non-coding | downstream | 74609 | 1480070 ~ 1480308 (+) |
| G215455 | NA | other | upstream | 289384 | 1084442 ~ 1086530 (+) |
| G215012 | NA | other | upstream | 857727 | 516360 ~ 518187 (+) |
| G215792 | NA | other | downstream | 117808 | 1489352 ~ 1577030 (+) |
| G215820 | LOC100136727 | other | downstream | 204177 | 1609638 ~ 1616379 (+) |
| LOC118944469 | LOC100136727 | other | downstream | 230137 | 1635598 ~ 1680107 (+) |
| G215830 | NA | other | downstream | 264950 | 1670411 ~ 1747282 (+) |
| G215843 | LOC100136727 | other | downstream | 398927 | 1804388 ~ 1805255 (+) |
