Gene
RNA
| Item | Value |
|---|---|
| gene id | G215728 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1376962 ~ 1377893 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245595 | True | 316 | lncRNA | 0.59 | 2 | 1376962 | 1377893 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 495931 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 861753 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 1126414 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 1221391 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 1302409 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 193784 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 196471 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 205223 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 229148 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 283767 | 1661660 ~ 1673583 (-) |
| G215725 | NA | non-coding | downstream | 2028 | 1373395 ~ 1374934 (-) |
| G215718 | NA | non-coding | downstream | 25080 | 1333369 ~ 1351882 (-) |
| G215714 | NA | non-coding | downstream | 52845 | 1323851 ~ 1324117 (-) |
| G215668 | NA | non-coding | downstream | 194617 | 1181764 ~ 1182345 (-) |
| G215649 | NA | non-coding | downstream | 241143 | 1135278 ~ 1135819 (-) |
| G215733 | NA | non-coding | upstream | 9339 | 1387232 ~ 1387501 (-) |
| G215748 | NA | non-coding | upstream | 46753 | 1424646 ~ 1425645 (-) |
| G215779 | NA | non-coding | upstream | 100225 | 1478118 ~ 1480038 (-) |
| G215781 | NA | non-coding | upstream | 102899 | 1480792 ~ 1481056 (-) |
| G215785 | NA | non-coding | upstream | 106387 | 1484280 ~ 1484771 (-) |
| G215354 | NA | other | downstream | 457289 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 895353 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 1197371 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 222333 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 281187 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 548851 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 680022 | 2057915 ~ 2058429 (-) |
