Gene
RNA
| Item | Value |
|---|---|
| gene id | G215575 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1408531 ~ 1418926 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245403 | False | 267 | lncRNA | 0.46 | 2 | 1408531 | 1409603 |
| TU245404 | False | 273 | lncRNA | 0.45 | 2 | 1408531 | 1418926 |
| TU245405 | True | 274 | lncRNA | 0.43 | 3 | 1408531 | 1418640 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944732 | NA | coding | upstream | 99194 | 1307007 ~ 1309337 (+) |
| LOC118944464 | NA | coding | upstream | 279759 | 1125317 ~ 1130309 (+) |
| irx1a | LOC106593994 | coding | upstream | 463700 | 940563 ~ 944831 (+) |
| LOC118964344 | NA | coding | upstream | 1192128 | 213740 ~ 216403 (+) |
| LOC118964343 | NA | coding | upstream | 1212015 | 195431 ~ 196516 (+) |
| LOC118944733 | plekha8 | coding | downstream | 116953 | 1535879 ~ 1538143 (+) |
| LOC118964346 | LOC106597212 | coding | downstream | 126331 | 1545257 ~ 1567659 (+) |
| LOC118944738 | LOC100136727 | coding | downstream | 190778 | 1609704 ~ 1611504 (+) |
| LOC118944466 | LOC100136727 | coding | downstream | 196620 | 1615546 ~ 1618046 (+) |
| LOC118964347 | LOC100136727 | coding | downstream | 203231 | 1622157 ~ 1626290 (+) |
| G215560 | NA | non-coding | upstream | 3070 | 1375914 ~ 1405461 (+) |
| G215555 | NA | non-coding | upstream | 47251 | 1359382 ~ 1361280 (+) |
| G215544 | NA | non-coding | upstream | 97469 | 1310354 ~ 1311062 (+) |
| G215531 | NA | non-coding | upstream | 122011 | 1285796 ~ 1286520 (+) |
| G215528 | NA | non-coding | upstream | 143217 | 1264547 ~ 1265314 (+) |
| G215582 | NA | non-coding | downstream | 9270 | 1428196 ~ 1431723 (+) |
| G215591 | NA | non-coding | downstream | 25395 | 1444321 ~ 1448803 (+) |
| G215777 | NA | non-coding | downstream | 59192 | 1478118 ~ 1480022 (+) |
| G215778 | NA | non-coding | downstream | 61144 | 1480070 ~ 1480308 (+) |
| G215782 | NA | non-coding | downstream | 63083 | 1482009 ~ 1483294 (+) |
| G215455 | NA | other | upstream | 322001 | 1084442 ~ 1086530 (+) |
| G215012 | NA | other | upstream | 890344 | 516360 ~ 518187 (+) |
| G215792 | NA | other | downstream | 104343 | 1489352 ~ 1577030 (+) |
| G215820 | LOC100136727 | other | downstream | 190712 | 1609638 ~ 1616379 (+) |
| LOC118944469 | LOC100136727 | other | downstream | 216672 | 1635598 ~ 1680107 (+) |
| G215830 | NA | other | downstream | 251485 | 1670411 ~ 1747282 (+) |
| G215843 | LOC100136727 | other | downstream | 385462 | 1804388 ~ 1805255 (+) |
