Gene
RNA
| Item | Value |
|---|---|
| gene id | G215748 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1424646 ~ 1425645 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106563894 isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245621 | True | 515 | lncRNA | 0.54 | 2 | 1424646 | 1425645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 543615 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 909437 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 1174098 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 1269075 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 1350093 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 146032 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 148719 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 157471 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 181396 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 236015 | 1661660 ~ 1673583 (-) |
| G215733 | NA | non-coding | downstream | 37145 | 1387232 ~ 1387501 (-) |
| G215728 | NA | non-coding | downstream | 46753 | 1376962 ~ 1377893 (-) |
| G215725 | NA | non-coding | downstream | 49712 | 1373395 ~ 1374934 (-) |
| G215718 | NA | non-coding | downstream | 72764 | 1333369 ~ 1351882 (-) |
| G215714 | NA | non-coding | downstream | 100529 | 1323851 ~ 1324117 (-) |
| G215779 | NA | non-coding | upstream | 52473 | 1478118 ~ 1480038 (-) |
| G215781 | NA | non-coding | upstream | 55147 | 1480792 ~ 1481056 (-) |
| G215785 | NA | non-coding | upstream | 58635 | 1484280 ~ 1484771 (-) |
| G215789 | NA | non-coding | upstream | 61111 | 1486756 ~ 1486989 (-) |
| G215790 | NA | non-coding | upstream | 62887 | 1488532 ~ 1488786 (-) |
| G215354 | NA | other | downstream | 504973 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 943037 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 1245055 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 174581 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 233435 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 501099 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 632270 | 2057915 ~ 2058429 (-) |
