Gene
RNA
| Item | Value |
|---|---|
| gene id | G215779 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1478118 ~ 1480038 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245666 | True | 450 | lncRNA | 0.38 | 3 | 1478118 | 1480038 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964345 | NA | coding | downstream | 597087 | 879000 ~ 881031 (-) |
| irx2a | irx2 | coding | downstream | 962909 | 510967 ~ 515209 (-) |
| LOC118944729 | NA | coding | downstream | 1227570 | 247153 ~ 252277 (-) |
| irx4a | LOC105016487 | coding | downstream | 1322547 | 147740 ~ 155571 (-) |
| LOC118964342 | NA | coding | downstream | 1403565 | 63916 ~ 74553 (-) |
| LOC118936608 | hacl1 | coding | upstream | 91639 | 1571677 ~ 1581702 (-) |
| LOC118944736 | NA | coding | upstream | 94326 | 1574364 ~ 1575575 (-) |
| LOC118944735 | LOC106595845 | coding | upstream | 103078 | 1583116 ~ 1593615 (-) |
| LOC118944737 | NA | coding | upstream | 127003 | 1607041 ~ 1609598 (-) |
| LOC110519742 | LOC106595845 | coding | upstream | 181622 | 1661660 ~ 1673583 (-) |
| G215748 | NA | non-coding | downstream | 52473 | 1424646 ~ 1425645 (-) |
| G215733 | NA | non-coding | downstream | 90617 | 1387232 ~ 1387501 (-) |
| G215728 | NA | non-coding | downstream | 100225 | 1376962 ~ 1377893 (-) |
| G215725 | NA | non-coding | downstream | 103184 | 1373395 ~ 1374934 (-) |
| G215718 | NA | non-coding | downstream | 126236 | 1333369 ~ 1351882 (-) |
| G215781 | NA | non-coding | upstream | 754 | 1480792 ~ 1481056 (-) |
| G215785 | NA | non-coding | upstream | 4242 | 1484280 ~ 1484771 (-) |
| G215789 | NA | non-coding | upstream | 6718 | 1486756 ~ 1486989 (-) |
| G215790 | NA | non-coding | upstream | 8494 | 1488532 ~ 1488786 (-) |
| G215804 | NA | non-coding | upstream | 11073 | 1491111 ~ 1518205 (-) |
| G215354 | NA | other | downstream | 558445 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 996509 | 481047 ~ 481609 (-) |
| G214663 | NA | other | downstream | 1298527 | 177723 ~ 179591 (-) |
| G215950 | NA | other | upstream | 120188 | 1600226 ~ 1618140 (-) |
| G215956 | NA | other | upstream | 179042 | 1659080 ~ 1682022 (-) |
| LOC110516567 | LOC106595628 | other | upstream | 446706 | 1916571 ~ 1953363 (-) |
| G216038 | NA | other | upstream | 577877 | 2057915 ~ 2058429 (-) |
