G215828


Basic Information

Item Value
gene id G215828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1659224 ~ 1682030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245755
tggagggaaatgctgtaggaatgctcaaccggtgtcgctcattcagccgacaaactttcaaccggttttccccattaagcagcgagtcggagtcaaaggccgagccttctcttgtctctactcctcccgttacggggtcagagacgccgaagcttcccaccattagctctgacaaattgaaaactctagtcattggcgactccattacccgcagtattagacttaaaacgaatcatccagcgatcatacactgtttacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245755 True 259 lncRNA 0.49 2 1659224 1682030

Neighbor

gene id symbol gene type direction distance location
LOC118944469 LOC100136727 coding upstream 14868 1635598 ~ 1680107 (+)
LOC118944468 LOC100136727 coding upstream 21672 1630106 ~ 1637552 (+)
LOC118964347 LOC100136727 coding upstream 32934 1622157 ~ 1626290 (+)
LOC118944466 LOC100136727 coding upstream 41178 1615546 ~ 1618046 (+)
LOC118944738 LOC100136727 coding upstream 47720 1609704 ~ 1611504 (+)
LOC118944750 LOC100136727 coding downstream 7728 1689758 ~ 1691571 (+)
LOC118944749 LOC100136727 coding downstream 13683 1695713 ~ 1697610 (+)
LOC118944747 LOC100136727 coding downstream 19726 1701756 ~ 1704997 (+)
LOC118944744 LOC100136727 coding downstream 27078 1709108 ~ 1717917 (+)
LOC118944745 LOC100136727 coding downstream 50888 1732918 ~ 1736240 (+)
G215792 NA non-coding upstream 82194 1489352 ~ 1577030 (+)
G215795 NA non-coding upstream 164665 1491937 ~ 1494559 (+)
G215782 NA non-coding upstream 175930 1482009 ~ 1483294 (+)
G215778 NA non-coding upstream 178916 1480070 ~ 1480308 (+)
G215777 NA non-coding upstream 179202 1478118 ~ 1480022 (+)
LOC118944761 LOC100136727 non-coding downstream 137392 1819422 ~ 1827499 (+)
G215853 NA non-coding downstream 241279 1923309 ~ 2021561 (+)
G215894 NA non-coding downstream 331837 2013867 ~ 2014326 (+)
G215900 NA non-coding downstream 341055 2023085 ~ 2023300 (+)
G215904 NA non-coding downstream 348730 2030760 ~ 2030962 (+)
G215820 LOC100136727 other upstream 42845 1609638 ~ 1616379 (+)
G215455 NA other upstream 572694 1084442 ~ 1086530 (+)
G215012 NA other upstream 1141037 516360 ~ 518187 (+)
G215843 LOC100136727 other downstream 122358 1804388 ~ 1805255 (+)
ahr1a LOC106605709 other downstream 278838 1960781 ~ 1987480 (+)
G216353 NA other downstream 779187 2461217 ~ 2462744 (+)
G216438 NA other downstream 890365 2572395 ~ 2574899 (+)
LOC110506718 LOC102207154 other downstream 1335134 3017105 ~ 3022686 (+)

Expression


Co-expression Network