G215972


Basic Information

Item Value
gene id G215972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 1775000 ~ 1806023 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245937
gccggtcgcagcttcagaggtggcgtcgtcgccagacgggccggtcgcagcttcagaggtggcgtcgtcgccagacgggccggtcgcagcttcaagaggtggcgtcgtcgccaggacgggccggtcgcagcttcagaggtggcgtcgtcgccagacgggccggtcgcagcttcagaggtggcctcgtcgccagacgggccggtcgcagcttcagaggtggcggcgtcgccagacgggccggtcgcagcttcagaggtggcggcgtcgccagacgggccggtcgcagcttcagaggtggcgtcgtcgccagacgggccggtcgcagcttcagaggtggcggcgtcgccagacgggccggtcgcagcttcagaggtggcgtcgtcgccagacgggccggtcgcagcttcagaggtggcggcgtcgccagacgggccggtcgcagcttcagaggtggcggcgtcgccagacgggccggtcgcagcttcagaggtggcgg

Function

NR:

description
polysialoglycoprotein precursor

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU245937 True 496 lncRNA 0.73 2 1775000 1806023

Neighbor

gene id symbol gene type direction distance location
LOC118944751 LOC106595628 coding downstream 19205 1750419 ~ 1755795 (-)
LOC118944740 LOC106595845 coding downstream 24738 1739961 ~ 1750262 (-)
LOC110519742 LOC106595845 coding downstream 101417 1661660 ~ 1673583 (-)
LOC118944737 NA coding downstream 165402 1607041 ~ 1609598 (-)
LOC118944735 LOC106595845 coding downstream 181385 1583116 ~ 1593615 (-)
LOC110515047 LOC106595845 coding upstream 100114 1906137 ~ 1910903 (-)
LOC110516567 LOC106595628 coding upstream 110548 1916571 ~ 1953363 (-)
LOC118944769 NA coding upstream 368235 2174258 ~ 2190541 (-)
LOC118936266 twist1 coding upstream 387774 2193797 ~ 2195426 (-)
LOC118944471 LOC106573719 coding upstream 419795 2225818 ~ 2229438 (-)
G215954 NA non-coding downstream 55041 1645154 ~ 1719959 (-)
G215963 LOC100136727 non-coding downstream 58212 1690406 ~ 1716788 (-)
G215946 NA non-coding downstream 98552 1595318 ~ 1676448 (-)
G215985 NA non-coding upstream 135205 1941228 ~ 1941675 (-)
G216026 NA non-coding upstream 219704 2025727 ~ 2025938 (-)
G216027 NA non-coding upstream 220224 2026247 ~ 2026792 (-)
G216029 NA non-coding upstream 226512 2032535 ~ 2032988 (-)
G216031 NA non-coding upstream 229353 2035376 ~ 2035667 (-)
G215956 NA other downstream 92978 1659080 ~ 1682022 (-)
G215950 NA other downstream 156860 1600226 ~ 1618140 (-)
G215354 NA other downstream 855327 915959 ~ 919673 (-)
G214982 NA other downstream 1293391 481047 ~ 481609 (-)
G216038 NA other upstream 251892 2057915 ~ 2058429 (-)
G216066 NA other upstream 315180 2121203 ~ 2121857 (-)
G216059 NA other upstream 318153 2124176 ~ 2125352 (-)
G216811 NA other upstream 930838 2736861 ~ 2738467 (-)

Expression


Co-expression Network