Gene
RNA
| Item | Value |
|---|---|
| gene id | G215973 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1790947 ~ 1814787 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| polysialoglycoprotein precursor |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245943 | True | 374 | lncRNA | 0.37 | 3 | 1790947 | 1814787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944751 | LOC106595628 | coding | downstream | 35152 | 1750419 ~ 1755795 (-) |
| LOC118944740 | LOC106595845 | coding | downstream | 40685 | 1739961 ~ 1750262 (-) |
| LOC110519742 | LOC106595845 | coding | downstream | 117364 | 1661660 ~ 1673583 (-) |
| LOC118944737 | NA | coding | downstream | 181349 | 1607041 ~ 1609598 (-) |
| LOC118944735 | LOC106595845 | coding | downstream | 197332 | 1583116 ~ 1593615 (-) |
| LOC110515047 | LOC106595845 | coding | upstream | 91350 | 1906137 ~ 1910903 (-) |
| LOC110516567 | LOC106595628 | coding | upstream | 101784 | 1916571 ~ 1953363 (-) |
| LOC118944769 | NA | coding | upstream | 359471 | 2174258 ~ 2190541 (-) |
| LOC118936266 | twist1 | coding | upstream | 379010 | 2193797 ~ 2195426 (-) |
| LOC118944471 | LOC106573719 | coding | upstream | 411031 | 2225818 ~ 2229438 (-) |
| G215954 | NA | non-coding | downstream | 70988 | 1645154 ~ 1719959 (-) |
| G215963 | LOC100136727 | non-coding | downstream | 74159 | 1690406 ~ 1716788 (-) |
| G215951 | LOC100136727 | non-coding | downstream | 147954 | 1630781 ~ 1642993 (-) |
| G215985 | NA | non-coding | upstream | 126441 | 1941228 ~ 1941675 (-) |
| G216026 | NA | non-coding | upstream | 210940 | 2025727 ~ 2025938 (-) |
| G216027 | NA | non-coding | upstream | 211460 | 2026247 ~ 2026792 (-) |
| G216029 | NA | non-coding | upstream | 217748 | 2032535 ~ 2032988 (-) |
| G216031 | NA | non-coding | upstream | 220589 | 2035376 ~ 2035667 (-) |
| G215956 | NA | other | downstream | 108925 | 1659080 ~ 1682022 (-) |
| G215950 | NA | other | downstream | 172807 | 1600226 ~ 1618140 (-) |
| G215354 | NA | other | downstream | 871274 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 1309338 | 481047 ~ 481609 (-) |
| G216038 | NA | other | upstream | 243128 | 2057915 ~ 2058429 (-) |
| G216066 | NA | other | upstream | 306416 | 2121203 ~ 2121857 (-) |
| G216059 | NA | other | upstream | 309389 | 2124176 ~ 2125352 (-) |
| G216811 | NA | other | upstream | 922074 | 2736861 ~ 2738467 (-) |
