Gene
RNA
| Item | Value |
|---|---|
| gene id | G215985 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1941228 ~ 1941675 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245957 | True | 422 | lncRNA | 0.46 | 2 | 1941228 | 1941675 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515047 | LOC106595845 | coding | downstream | 30325 | 1906137 ~ 1910903 (-) |
| LOC118944751 | LOC106595628 | coding | downstream | 185433 | 1750419 ~ 1755795 (-) |
| LOC118944740 | LOC106595845 | coding | downstream | 190966 | 1739961 ~ 1750262 (-) |
| LOC110519742 | LOC106595845 | coding | downstream | 267645 | 1661660 ~ 1673583 (-) |
| LOC118944737 | NA | coding | downstream | 331630 | 1607041 ~ 1609598 (-) |
| LOC118944769 | NA | coding | upstream | 232583 | 2174258 ~ 2190541 (-) |
| LOC118936266 | twist1 | coding | upstream | 252122 | 2193797 ~ 2195426 (-) |
| LOC118944471 | LOC106573719 | coding | upstream | 284143 | 2225818 ~ 2229438 (-) |
| LOC110506602 | LOC106595809 | coding | upstream | 301812 | 2243487 ~ 2249509 (-) |
| sp8b | LOC106573674 | coding | upstream | 344619 | 2286294 ~ 2292006 (-) |
| G215973 | NA | non-coding | downstream | 126441 | 1790947 ~ 1814787 (-) |
| G215972 | NA | non-coding | downstream | 135205 | 1775000 ~ 1806023 (-) |
| G215954 | NA | non-coding | downstream | 221269 | 1645154 ~ 1719959 (-) |
| G215963 | LOC100136727 | non-coding | downstream | 224440 | 1690406 ~ 1716788 (-) |
| G216026 | NA | non-coding | upstream | 84052 | 2025727 ~ 2025938 (-) |
| G216027 | NA | non-coding | upstream | 84572 | 2026247 ~ 2026792 (-) |
| G216029 | NA | non-coding | upstream | 90860 | 2032535 ~ 2032988 (-) |
| G216031 | NA | non-coding | upstream | 93701 | 2035376 ~ 2035667 (-) |
| G216033 | NA | non-coding | upstream | 97048 | 2038723 ~ 2038972 (-) |
| G215956 | NA | other | downstream | 259206 | 1659080 ~ 1682022 (-) |
| G215950 | NA | other | downstream | 323088 | 1600226 ~ 1618140 (-) |
| G215354 | NA | other | downstream | 1021555 | 915959 ~ 919673 (-) |
| G214982 | NA | other | downstream | 1459619 | 481047 ~ 481609 (-) |
| G216038 | NA | other | upstream | 116240 | 2057915 ~ 2058429 (-) |
| G216066 | NA | other | upstream | 179528 | 2121203 ~ 2121857 (-) |
| G216059 | NA | other | upstream | 182501 | 2124176 ~ 2125352 (-) |
| G216811 | NA | other | upstream | 795186 | 2736861 ~ 2738467 (-) |
| G216902 | LOC106606079 | other | upstream | 1104330 | 3046005 ~ 3059744 (-) |
