Gene
RNA
| Item | Value |
|---|---|
| gene id | G215900 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2023085 ~ 2023300 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU245841 | True | 216 | lncRNA | 0.37 | 1 | 2023085 | 2023300 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ahr1a | LOC106605709 | coding | upstream | 35605 | 1960781 ~ 1987480 (+) |
| LOC118944758 | LOC100136727 | coding | upstream | 138179 | 1882585 ~ 1884906 (+) |
| LOC118944757 | LOC100136727 | coding | upstream | 145001 | 1875760 ~ 1878084 (+) |
| LOC118944756 | LOC100136727 | coding | upstream | 159859 | 1860933 ~ 1863226 (+) |
| LOC118944761 | LOC100136727 | coding | upstream | 195586 | 1819422 ~ 1827499 (+) |
| abcb5 | LOC106574003 | coding | downstream | 235251 | 2258551 ~ 2284314 (+) |
| LOC118944474 | NA | coding | downstream | 391171 | 2414471 ~ 2419132 (+) |
| fhod3b | fhod3 | coding | downstream | 582723 | 2606023 ~ 2853339 (+) |
| LOC110517892 | LOC106606083 | coding | downstream | 848112 | 2871412 ~ 2883602 (+) |
| LOC110520727 | LOC106606081 | coding | downstream | 901141 | 2924441 ~ 2943873 (+) |
| G215853 | NA | non-coding | upstream | 1524 | 1923309 ~ 2021561 (+) |
| G215894 | NA | non-coding | upstream | 8759 | 2013867 ~ 2014326 (+) |
| G215828 | NA | non-coding | upstream | 341055 | 1659224 ~ 1682030 (+) |
| G215815 | NA | non-coding | upstream | 353507 | 1589307 ~ 1669578 (+) |
| G215904 | NA | non-coding | downstream | 7460 | 2030760 ~ 2030962 (+) |
| G215906 | NA | non-coding | downstream | 8850 | 2032150 ~ 2032404 (+) |
| G215910 | NA | non-coding | downstream | 14600 | 2037900 ~ 2038204 (+) |
| G215911 | NA | non-coding | downstream | 14975 | 2038275 ~ 2038516 (+) |
| G215912 | NA | non-coding | downstream | 16724 | 2040024 ~ 2042177 (+) |
| G215843 | LOC100136727 | other | upstream | 217830 | 1804388 ~ 1805255 (+) |
| G215830 | NA | other | upstream | 275803 | 1670411 ~ 1747282 (+) |
| LOC118944469 | LOC100136727 | other | upstream | 342978 | 1635598 ~ 1680107 (+) |
| G215820 | LOC100136727 | other | upstream | 406706 | 1609638 ~ 1616379 (+) |
| G216353 | NA | other | downstream | 437917 | 2461217 ~ 2462744 (+) |
| G216438 | NA | other | downstream | 549095 | 2572395 ~ 2574899 (+) |
| LOC110506718 | LOC102207154 | other | downstream | 993864 | 3017105 ~ 3022686 (+) |
| G216640 | LOC106606088 | other | downstream | 1016686 | 3039986 ~ 3041517 (+) |
| G216673 | NA | other | downstream | 1083054 | 3106354 ~ 3108233 (+) |
