G215911


Basic Information

Item Value
gene id G215911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2038275 ~ 2038516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU245852
TCCTTTGTGTTTGGCTGCTGGCTACCACTGCTATATTTAGAAAGCCTAGCAATGCAGCCCGCTGAAAGCACAGCATCAGGGACCTGGCTAAAGATAGAACGCTGACCTGTAGGTCAGGATACAATGCGGCTAGGATGCTTTTAAAATGGGCTTTCAGATTTAACACAAGAgtaaacactgagtgtacaagacattagaaacaccttcctaatgtctttatttttatttaacctttatttaac

Function

NR:

description
PREDICTED: fatty acid synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245852 True 242 lncRNA 0.41 1 2038275 2038516

Neighbor

gene id symbol gene type direction distance location
ahr1a LOC106605709 coding upstream 50795 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 153369 1882585 ~ 1884906 (+)
LOC118944757 LOC100136727 coding upstream 160191 1875760 ~ 1878084 (+)
LOC118944756 LOC100136727 coding upstream 175049 1860933 ~ 1863226 (+)
LOC118944761 LOC100136727 coding upstream 210776 1819422 ~ 1827499 (+)
abcb5 LOC106574003 coding downstream 220035 2258551 ~ 2284314 (+)
LOC118944474 NA coding downstream 375955 2414471 ~ 2419132 (+)
fhod3b fhod3 coding downstream 567507 2606023 ~ 2853339 (+)
LOC110517892 LOC106606083 coding downstream 832896 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 885925 2924441 ~ 2943873 (+)
G215910 NA non-coding upstream 71 2037900 ~ 2038204 (+)
G215906 NA non-coding upstream 5871 2032150 ~ 2032404 (+)
G215904 NA non-coding upstream 7313 2030760 ~ 2030962 (+)
G215900 NA non-coding upstream 14975 2023085 ~ 2023300 (+)
G215853 NA non-coding upstream 16714 1923309 ~ 2021561 (+)
G215912 NA non-coding downstream 1508 2040024 ~ 2042177 (+)
G215913 NA non-coding downstream 1940 2040456 ~ 2040784 (+)
G215916 NA non-coding downstream 18976 2057492 ~ 2095938 (+)
G215919 NA non-coding downstream 21536 2060052 ~ 2100249 (+)
G215890 NA non-coding downstream 85658 2124174 ~ 2125359 (+)
G215843 LOC100136727 other upstream 233020 1804388 ~ 1805255 (+)
G215830 NA other upstream 290993 1670411 ~ 1747282 (+)
LOC118944469 LOC100136727 other upstream 358168 1635598 ~ 1680107 (+)
G215820 LOC100136727 other upstream 421896 1609638 ~ 1616379 (+)
G216353 NA other downstream 422701 2461217 ~ 2462744 (+)
G216438 NA other downstream 533879 2572395 ~ 2574899 (+)
LOC110506718 LOC102207154 other downstream 978648 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 1001470 3039986 ~ 3041517 (+)
G216673 NA other downstream 1067838 3106354 ~ 3108233 (+)

Expression


Co-expression Network