Gene
RNA
| Item | Value |
|---|---|
| gene id | G216049 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2093278 ~ 2096866 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone deacetylase 9-B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246032 | True | 296 | lncRNA | 0.57 | 2 | 2093278 | 2096866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516567 | LOC106595628 | coding | downstream | 139915 | 1916571 ~ 1953363 (-) |
| LOC110515047 | LOC106595845 | coding | downstream | 182375 | 1906137 ~ 1910903 (-) |
| LOC118944751 | LOC106595628 | coding | downstream | 337483 | 1750419 ~ 1755795 (-) |
| LOC118944740 | LOC106595845 | coding | downstream | 343016 | 1739961 ~ 1750262 (-) |
| LOC110519742 | LOC106595845 | coding | downstream | 419695 | 1661660 ~ 1673583 (-) |
| LOC118944769 | NA | coding | upstream | 77392 | 2174258 ~ 2190541 (-) |
| LOC118936266 | twist1 | coding | upstream | 96931 | 2193797 ~ 2195426 (-) |
| LOC118944471 | LOC106573719 | coding | upstream | 128952 | 2225818 ~ 2229438 (-) |
| LOC110506602 | LOC106595809 | coding | upstream | 146621 | 2243487 ~ 2249509 (-) |
| sp8b | LOC106573674 | coding | upstream | 189428 | 2286294 ~ 2292006 (-) |
| G216033 | NA | non-coding | downstream | 54306 | 2038723 ~ 2038972 (-) |
| G216031 | NA | non-coding | downstream | 57611 | 2035376 ~ 2035667 (-) |
| G216029 | NA | non-coding | downstream | 60290 | 2032535 ~ 2032988 (-) |
| G216027 | NA | non-coding | downstream | 66486 | 2026247 ~ 2026792 (-) |
| G216026 | NA | non-coding | downstream | 67340 | 2025727 ~ 2025938 (-) |
| G216076 | NA | non-coding | upstream | 39386 | 2136252 ~ 2136479 (-) |
| G216150 | NA | non-coding | upstream | 66819 | 2163685 ~ 2165194 (-) |
| G216184 | NA | non-coding | upstream | 137876 | 2234742 ~ 2235806 (-) |
| G216186 | NA | non-coding | upstream | 140263 | 2237129 ~ 2237700 (-) |
| G216038 | NA | other | downstream | 34849 | 2057915 ~ 2058429 (-) |
| G215956 | NA | other | downstream | 411256 | 1659080 ~ 1682022 (-) |
| G215950 | NA | other | downstream | 475138 | 1600226 ~ 1618140 (-) |
| G216066 | NA | other | upstream | 24337 | 2121203 ~ 2121857 (-) |
| G216059 | NA | other | upstream | 27310 | 2124176 ~ 2125352 (-) |
| G216811 | NA | other | upstream | 639995 | 2736861 ~ 2738467 (-) |
| G216902 | LOC106606079 | other | upstream | 949139 | 3046005 ~ 3059744 (-) |
| G217261 | NA | other | upstream | 1241320 | 3338186 ~ 3338580 (-) |
