G216087


Basic Information

Item Value
gene id G216087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2147948 ~ 2148180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246074
aatcagttgtgttgtgacaaggtaggggtggtatacagaagatagccctatttggtaaaagaccaagtccatattatgtcaagaacagctcaaataagcaaagagaaatgacagtccatcattactttaagacatgacggtcagtcaatccagaccatttcaagaactttgaaagtttcttcaagtgcagtcgcaaaaaccatcaagttctatgataaaactggctctgatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246074 True 233 lncRNA 0.38 1 2147948 2148180

Neighbor

gene id symbol gene type direction distance location
LOC110513668 LOC106595161 coding upstream 24044 2010277 ~ 2123904 (+)
ahr1a LOC106605709 coding upstream 160468 1960781 ~ 1987480 (+)
LOC118944758 LOC100136727 coding upstream 263042 1882585 ~ 1884906 (+)
LOC118944757 LOC100136727 coding upstream 269864 1875760 ~ 1878084 (+)
LOC118944756 LOC100136727 coding upstream 284722 1860933 ~ 1863226 (+)
abcb5 LOC106574003 coding downstream 110371 2258551 ~ 2284314 (+)
LOC118944474 NA coding downstream 266291 2414471 ~ 2419132 (+)
fhod3b fhod3 coding downstream 457843 2606023 ~ 2853339 (+)
LOC110517892 LOC106606083 coding downstream 723232 2871412 ~ 2883602 (+)
LOC110520727 LOC106606081 coding downstream 776261 2924441 ~ 2943873 (+)
G216069 NA non-coding upstream 18123 2129317 ~ 2129825 (+)
G215890 NA non-coding upstream 22589 2124174 ~ 2125359 (+)
G215919 NA non-coding upstream 47699 2060052 ~ 2100249 (+)
G215916 NA non-coding upstream 52010 2057492 ~ 2095938 (+)
G215912 NA non-coding upstream 105771 2040024 ~ 2042177 (+)
G216111 NA non-coding downstream 45704 2193884 ~ 2194383 (+)
G216119 NA non-coding downstream 76503 2224683 ~ 2226639 (+)
G216214 NA non-coding downstream 152955 2301135 ~ 2301430 (+)
G216226 NA non-coding downstream 163546 2311726 ~ 2312188 (+)
G216237 NA non-coding downstream 185594 2333774 ~ 2334385 (+)
G215843 LOC100136727 other upstream 342693 1804388 ~ 1805255 (+)
G215830 NA other upstream 400666 1670411 ~ 1747282 (+)
LOC118944469 LOC100136727 other upstream 467841 1635598 ~ 1680107 (+)
G215820 LOC100136727 other upstream 531569 1609638 ~ 1616379 (+)
G216353 NA other downstream 313037 2461217 ~ 2462744 (+)
G216438 NA other downstream 424215 2572395 ~ 2574899 (+)
LOC110506718 LOC102207154 other downstream 868984 3017105 ~ 3022686 (+)
G216640 LOC106606088 other downstream 891806 3039986 ~ 3041517 (+)
G216673 NA other downstream 958174 3106354 ~ 3108233 (+)

Expression


Co-expression Network