G216150


Basic Information

Item Value
gene id G216150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2163685 ~ 2165194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246150
ATCAGGAAACCTTTAGGGATCTGGTCTGGAGAGAGACTCCACACTAACAGATATCAGGAGACCTTTAGGGATCTGGTCTGGAGAGAGACTCCACACCAACAGATATCAGGAAACCTTTAGGGATCTGGTCTAGAGAGAGACTCCACACTAACAGATATCAGGAGACCTTTAGGGATCTGGTCTGGAGAGAGACTCCACACCAACAGATATCAGGAGATCTTTAGGGATCTGGTCTAGAGAGAGACTCCACACCAACAGATATCAGGAGACCTTTAGGGATCTGGTCTGGAGAGAGACCACAGCAGCCGTCATTGAGAGATCCCAGTCCACTTCCACCACTAGATATTTACTGTCCTGTTCTTTGTACCCAGCACCCTGCAGATGGAATCTAGCATCCTCTTTTAAGGAGACACTGTGTGACTCATTAACCGTCAACAGTTCATAACCTCCAAGGGGCTATTAAACTCACTCTTTTGGCCGCCAAACAGAACTGGCAAATGTTTCATTTGGACCAATAAGTTATTTAAATGTTTTCGCTTTCTCAAACCCTGCGTACAAGTGCAACAAAACACTCCTTTCAAAGTCAACATTGTGTCAAAAATAAACGCACGGCCATTTAattaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246150 True 626 lncRNA 0.45 2 2163685 2165194

Neighbor

gene id symbol gene type direction distance location
LOC110516567 LOC106595628 coding downstream 210322 1916571 ~ 1953363 (-)
LOC110515047 LOC106595845 coding downstream 252782 1906137 ~ 1910903 (-)
LOC118944751 LOC106595628 coding downstream 407890 1750419 ~ 1755795 (-)
LOC118944740 LOC106595845 coding downstream 413423 1739961 ~ 1750262 (-)
LOC110519742 LOC106595845 coding downstream 490102 1661660 ~ 1673583 (-)
LOC118944769 NA coding upstream 9064 2174258 ~ 2190541 (-)
LOC118936266 twist1 coding upstream 28603 2193797 ~ 2195426 (-)
LOC118944471 LOC106573719 coding upstream 60624 2225818 ~ 2229438 (-)
LOC110506602 LOC106595809 coding upstream 78293 2243487 ~ 2249509 (-)
sp8b LOC106573674 coding upstream 121100 2286294 ~ 2292006 (-)
G216076 NA non-coding downstream 27206 2136252 ~ 2136479 (-)
G216049 NA non-coding downstream 66819 2093278 ~ 2096866 (-)
G216033 NA non-coding downstream 124713 2038723 ~ 2038972 (-)
G216031 NA non-coding downstream 128018 2035376 ~ 2035667 (-)
G216029 NA non-coding downstream 130697 2032535 ~ 2032988 (-)
G216184 NA non-coding upstream 69548 2234742 ~ 2235806 (-)
G216186 NA non-coding upstream 71935 2237129 ~ 2237700 (-)
G216185 NA non-coding upstream 73477 2238671 ~ 2239438 (-)
G216187 NA non-coding upstream 75646 2240840 ~ 2241669 (-)
G216059 NA other downstream 38333 2124176 ~ 2125352 (-)
G216066 NA other downstream 41828 2121203 ~ 2121857 (-)
G216038 NA other downstream 105256 2057915 ~ 2058429 (-)
G216811 NA other upstream 571667 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 880811 3046005 ~ 3059744 (-)
G217261 NA other upstream 1172992 3338186 ~ 3338580 (-)
G217459 NA other upstream 1521208 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 2273902 4439096 ~ 4440437 (-)

Expression


Co-expression Network