G216185


Basic Information

Item Value
gene id G216185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2238671 ~ 2239438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246197
GAGTAGCAGGGATAGTGAGCAGTAAGGGTCTGTGTCTTGCATTGTGGGTAGTGTAATAATGTGACAAGATACTACGAGTAGTGTCATGCGGTTCACTTTGGTCTCTAACATGTCACATCCGTTCAGTTAAAGATAAATGAGAATATTTGGGTTCCGTTAGGGACGACCATTGACCCTAATACAAAAGTCTGTTCATGATTGAAACGACTTGATTTACCATGGCAATAACACTTTAATTACATAGGCCTAGATCACATTCTCTGTACAGACAGATTGTATCCACAGAGGAAACCCTTCAGTTAAAAGACCTGAAGCTGAAATTCATCTGAAACTCCCAATCCTAACTCCCCAATTTATAAGCAATGAATCCTGTCCTTGAACCCTATATATGATTGAATCCTGTCCTTGAACCCTATATATGATTGAATCCTGTCCTTGAACCCTAAATATGATTGAATCCTGTCCTTGAACCTTATATATGATTGAATCTTGTCCTATAAtttcctggctgtgtgttttctgTTGACTTACTCTTGTTGACATTTTTAGTTtgactttctctcctctgtttattTAAGCTGGTTTCAACTGGGAGTTGCATTGTATGGTCTTTAGTCTTTATCTGTTGGCGTTGGCAACGGGGAAGCTCAGGATGTCTATCCTGTTTCTGTTCTGTATTACAGGTGAATGTTATGACTGCATACATTCTGGCTTAAAATAGAAGAacaaataaatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246197 True 738 lncRNA 0.39 2 2238671 2239438

Neighbor

gene id symbol gene type direction distance location
LOC118944471 LOC106573719 coding downstream 9233 2225818 ~ 2229438 (-)
LOC118936266 twist1 coding downstream 43245 2193797 ~ 2195426 (-)
LOC118944769 NA coding downstream 48130 2174258 ~ 2190541 (-)
LOC110516567 LOC106595628 coding downstream 285308 1916571 ~ 1953363 (-)
LOC110515047 LOC106595845 coding downstream 327768 1906137 ~ 1910903 (-)
LOC110506602 LOC106595809 coding upstream 4049 2243487 ~ 2249509 (-)
sp8b LOC106573674 coding upstream 46856 2286294 ~ 2292006 (-)
LOC118944775 NA coding upstream 114845 2354283 ~ 2388299 (-)
LOC118944776 LOC105018831 coding upstream 221725 2461163 ~ 2521910 (-)
LOC118964348 LOC106605991 coding upstream 306796 2546234 ~ 2553372 (-)
G216186 NA non-coding downstream 971 2237129 ~ 2237700 (-)
G216184 NA non-coding downstream 2865 2234742 ~ 2235806 (-)
G216150 NA non-coding downstream 73477 2163685 ~ 2165194 (-)
G216076 NA non-coding downstream 102192 2136252 ~ 2136479 (-)
G216187 NA non-coding upstream 1402 2240840 ~ 2241669 (-)
G216188 NA non-coding upstream 2292 2241730 ~ 2242295 (-)
G216199 NA non-coding upstream 28277 2267715 ~ 2270831 (-)
G216200 LOC106574003 non-coding upstream 37423 2276861 ~ 2278197 (-)
G216059 NA other downstream 113319 2124176 ~ 2125352 (-)
G216066 NA other downstream 116814 2121203 ~ 2121857 (-)
G216038 NA other downstream 180242 2057915 ~ 2058429 (-)
LOC110519742 LOC106595845 other downstream 575604 1661660 ~ 1673583 (-)
G216811 NA other upstream 497423 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 806567 3046005 ~ 3059744 (-)
G217261 NA other upstream 1098748 3338186 ~ 3338580 (-)
G217459 NA other upstream 1446964 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 2199658 4439096 ~ 4440437 (-)

Expression


Co-expression Network