G216187


Basic Information

Item Value
gene id G216187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 2240840 ~ 2241669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU246199
atatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaagtaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaaaatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtgtgaagtatgaattaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaatatcacttacatttagacagataagtaatatataactgaaatggtgacttggtgtgtatgaattaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaagtatgaattaatatcacttacattttgacagataagtaatatattaCTGAAATGGttacctggtgtgtatgaattaatatcacttacattttgacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaatatcacttacatttagacagataagtaatatataactgaaatggtgacctggtgtgtatgaattaatatcacttacatttagacagataagtaatatataactgaaatggtgacctggtgtgtatgaagtatgaattaatatcacttacattttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246199 True 830 lncRNA 0.46 1 2240840 2241669

Neighbor

gene id symbol gene type direction distance location
LOC118944471 LOC106573719 coding downstream 11402 2225818 ~ 2229438 (-)
LOC118936266 twist1 coding downstream 45414 2193797 ~ 2195426 (-)
LOC118944769 NA coding downstream 50299 2174258 ~ 2190541 (-)
LOC110516567 LOC106595628 coding downstream 287477 1916571 ~ 1953363 (-)
LOC110515047 LOC106595845 coding downstream 329937 1906137 ~ 1910903 (-)
LOC110506602 LOC106595809 coding upstream 1818 2243487 ~ 2249509 (-)
sp8b LOC106573674 coding upstream 44625 2286294 ~ 2292006 (-)
LOC118944775 NA coding upstream 112614 2354283 ~ 2388299 (-)
LOC118944776 LOC105018831 coding upstream 219494 2461163 ~ 2521910 (-)
LOC118964348 LOC106605991 coding upstream 304565 2546234 ~ 2553372 (-)
G216185 NA non-coding downstream 1402 2238671 ~ 2239438 (-)
G216186 NA non-coding downstream 3140 2237129 ~ 2237700 (-)
G216184 NA non-coding downstream 5034 2234742 ~ 2235806 (-)
G216150 NA non-coding downstream 75646 2163685 ~ 2165194 (-)
G216188 NA non-coding upstream 61 2241730 ~ 2242295 (-)
G216199 NA non-coding upstream 26046 2267715 ~ 2270831 (-)
G216200 LOC106574003 non-coding upstream 35192 2276861 ~ 2278197 (-)
G216202 LOC106574003 non-coding upstream 37627 2279296 ~ 2284314 (-)
G216059 NA other downstream 115488 2124176 ~ 2125352 (-)
G216066 NA other downstream 118983 2121203 ~ 2121857 (-)
G216038 NA other downstream 182411 2057915 ~ 2058429 (-)
LOC110519742 LOC106595845 other downstream 577773 1661660 ~ 1673583 (-)
G216811 NA other upstream 495192 2736861 ~ 2738467 (-)
G216902 LOC106606079 other upstream 804336 3046005 ~ 3059744 (-)
G217261 NA other upstream 1096517 3338186 ~ 3338580 (-)
G217459 NA other upstream 1444733 3686402 ~ 3689304 (-)
G218073 LOC106605488 other upstream 2197427 4439096 ~ 4440437 (-)

Expression


Co-expression Network