Gene
RNA
| Item | Value |
|---|---|
| gene id | G216228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2313133 ~ 2313366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU246260 | True | 234 | lncRNA | 0.40 | 1 | 2313133 | 2313366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sp8b | LOC106573674 | coding | downstream | 21127 | 2286294 ~ 2292006 (-) |
| LOC110506602 | LOC106595809 | coding | downstream | 63624 | 2243487 ~ 2249509 (-) |
| LOC118944471 | LOC106573719 | coding | downstream | 83695 | 2225818 ~ 2229438 (-) |
| LOC118936266 | twist1 | coding | downstream | 117707 | 2193797 ~ 2195426 (-) |
| LOC118944769 | NA | coding | downstream | 122592 | 2174258 ~ 2190541 (-) |
| LOC118944775 | NA | coding | upstream | 40917 | 2354283 ~ 2388299 (-) |
| LOC118944776 | LOC105018831 | coding | upstream | 147797 | 2461163 ~ 2521910 (-) |
| LOC118964348 | LOC106605991 | coding | upstream | 232868 | 2546234 ~ 2553372 (-) |
| LOC110519055 | LOC106606020 | coding | upstream | 253674 | 2567040 ~ 2581440 (-) |
| LOC110520772 | LOC108270036 | coding | upstream | 269874 | 2583240 ~ 2604766 (-) |
| G216225 | NA | non-coding | downstream | 3767 | 2309163 ~ 2309366 (-) |
| G216217 | NA | non-coding | downstream | 8555 | 2304375 ~ 2304578 (-) |
| G216216 | NA | non-coding | downstream | 9985 | 2302946 ~ 2303148 (-) |
| G216202 | LOC106574003 | non-coding | downstream | 28819 | 2279296 ~ 2284314 (-) |
| G216200 | LOC106574003 | non-coding | downstream | 34936 | 2276861 ~ 2278197 (-) |
| G216258 | NA | non-coding | upstream | 42306 | 2355672 ~ 2356333 (-) |
| G216269 | NA | non-coding | upstream | 62368 | 2375734 ~ 2376052 (-) |
| G216271 | NA | non-coding | upstream | 63167 | 2376533 ~ 2376768 (-) |
| G216390 | NA | non-coding | upstream | 170468 | 2483834 ~ 2484039 (-) |
| G216059 | NA | other | downstream | 187781 | 2124176 ~ 2125352 (-) |
| G216066 | NA | other | downstream | 191276 | 2121203 ~ 2121857 (-) |
| G216038 | NA | other | downstream | 254704 | 2057915 ~ 2058429 (-) |
| LOC110516567 | LOC106595628 | other | downstream | 360545 | 1916571 ~ 1953363 (-) |
| LOC110519742 | LOC106595845 | other | downstream | 650066 | 1661660 ~ 1673583 (-) |
| G216811 | NA | other | upstream | 423495 | 2736861 ~ 2738467 (-) |
| G216902 | LOC106606079 | other | upstream | 732639 | 3046005 ~ 3059744 (-) |
| G217261 | NA | other | upstream | 1024820 | 3338186 ~ 3338580 (-) |
| G217459 | NA | other | upstream | 1373036 | 3686402 ~ 3689304 (-) |
| G218073 | LOC106605488 | other | upstream | 2125730 | 4439096 ~ 4440437 (-) |
